| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3589 |
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| Symbol | |
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| ID | 4312485 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 416436 |
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| End bp | 419267 |
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| Gene Length | 2832 bp |
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| Protein Length | 943 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 638151431 |
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| Product | hypothetical protein |
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| Protein accession | YP_775477 |
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| Protein GI | 115358339 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00513024 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.358288 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATAACG CAATTATCAT TGCAGCAGAA AAATCCCCGT TCCTGGCCGG CGAACTGAAT
GCCTTCGGTC GCGACCCCGA CTGGGAGTTC GTAAAGGGGG AGGCAAATAA GGGAATCTTT
ACTGATTCGT CCAAGAAGAA GATCGCTTTT GATCCTACAT GGAGCGAATC TGCAACCTTA
TTCGCCACCA CGCTGGCGCA TGAACTCGGA CACGCGCTGC TGCCAGGCGG GACGGGCGGT
TCTTTGGCAC TGAATCCGGA TCAGGCCGTC GCGAATGGTT TGTCGAACGA AGGGGTTGCG
CTCCTTTCCG AATATATTGT GGCCATCCAG TTGGGGTTGA CCGGTGGTGC GGCCGGCCAC
ATGCATTCGG ACCAATCCGA CAGTCGGCTG ACGCTGCAAC TGAATCAACT GGCTCAGTCG
GTTGGCATCG ACGTCAAAAG CGTGACGTGG GGATCTGCTG CCGCTCACGC GCTCGCCGAT
TCGGATTCGG CCCTAGTCGA TGCTGCGGGG AAATACTACG GCACCGTCCA TCCGTCCCCG
GCCTTGCAAC TGACGTATAG CCAGTTTTAT GCGGATTGGT GGATTATCCA GCATTCCGGC
ATGGATCCGA ATCTCGTCGA CTGGCAGAAG GTCCAGGCCG ACATGATCAA GTACACCAAC
TTCACACTTG ATGGCCAGCC GGTATTCACG ATTGATACGA AGGGCATTCC GCTGCTGGAT
GGCGGATGGG CGGTGGTGAA TGGCGAAATT TCGCTGAAAG GAGTCGTAAC AAAGACTCTT
TTTAATGCCG ACGGCAAAAT CCAGGAGCAA GCGAAATACG ACTACACGGG ATTCAAGTTT
CAGAATATGC TTTTTGGGGG AGACGGCAAG GCAACCCATC GGTACGACTT TAAGCTCGAT
AACAGCTACA CGAAGTATGA TTTCGCCGCT GATGGTTCGC AGACTGCATC GCTATACGGC
ACGACCGGCC AGATGATCGA GTATGCGAAG TTCAATGCCA ATGGTTTCAA GACGCTGGAC
ATCTTCTATG GCGCGGATGG TAACGCCACG CAACAATACA ACTTCAACCT TGACAAGAGC
TATACGAAGT ACGATTTCAA TGCTAATGGT TCCCAGACCG CAACGTTGTA TGGCGTGAAC
GGCAAGATAA CCGAGTACGC GAAGTTCAAC GCCGATGGCT TCAAGACACT GGACATCTTC
TACGGAGCGA ATGGCAAGGC GGTACAGCAG TACAACTTCA ATCTGGATAA GAGCTACACG
AAGTACGACT TCGCCGCCGA TGGTTCACAG ACCGCCTCGC TGTACGGCAC GACCGGCCAG
ATGACCGAGT ACGCGAAGTT CAACGCCAAC GGTTTCAAGA CGCTGGATAT CTTCTACGGC
GCGAACGGCA AGGCCACGCA GCAGTACAAC TTCAATCTGG ATAAGAGCTA CACGAAGTAC
GACTTCGCTG CCGACGGCTC CCAGACCGCG ACGCTGTACG GCACGACCGG TCAGCTAACC
GAGTACGCGA AGTTCAATGC CGACGGCTTC AAGACACTGG ACATCTTCTA CGGAGCGAAT
GGCAAGGCGG TACAGCAGTA CAACTTCAAT TTGGACAAGA GCTACACGAA GTACGACTTC
GCCGCCGATG GTTCCCAAAC GGCGACGCTG TACGGCACGA CCGGCCAGAT AACCGAGTAT
GCGAAGTTCA ACGCCAACGG CAACAAGACG CTGGACATCT TCTACGGTGC TGACGGCAAG
GCCACGCAGC AGTACAACTT CAATTTGGAC AAGAGCTACA CGAAGTACGA CTTCGCCGCC
GATGGTTCCC AAACGGCGAC GCTGTACGGC ACGACCGGTC AGCTAACCGA GTACGCGAAG
TTCAACGCCA ACGGCTTCAA GACGCTGGAC ATTTTCTACG GTGCTGACGG CAAGGCGACG
CAGCAATACA ACTTCAACCT CGACAAGAGC TACACGAAGT ACGACTTTGC TGCCGATGGC
TCCCAGACCG CGACGCTGTA CGGCGCGGCT GGCCAGGTTA CCGAGTACGC GAAGTTCAAC
GCCAACGGCA ACAAAACACT GGACATCTTC TACGGTGCTG ACGGCAAGGC GACGCAACAG
TACAACTTCA ACCTGGACAA GAGCTACACA AAGTACGACT TCAATGCCGA CGGCTCGCAA
ACGGCGACGT TTTTCGGCGT CAATGGTCAA GTGAGCGAGT ATGCGAAATT CAACGCAGCC
GGTGTCAAGA CGCAGGATAT CGTCTTTGGC GCGGACGGAA AGGCAACCAA GCAGATCGAC
TTCAATATCG ATGGCAGCTA CGCCTCTCAC GTCTTTAATA GCGATGGCTC ACAATTCGCA
GCGCTGTTCG GCACCAATGG ACAGATGACA GAATATGCGA CATTTAATGC GGGCGGGTTC
AAGACACAAG ACATTTTTTA CTCGAACGGA CGGGCGACGC ATCGGTACGA TTTTGCTCTT
GACAAGAGTT TCATCGCTCA TGTGTTTGAC GGTTCAGATG AAATGGTCGC ACTTTTCGGT
GTGAACCATA TTGTTTATGA TTATTATAAG TATTCCTATG GAAAACTATT CGAACGTGAC
ATATTCGATG GTCTGGGGCG TCAGATCGAG GCTGACCGCT TTAGCACCTC AACGGGCAAG
CTTACCGGGT TCTCAAAGTT CACGTACAAC AGTGATGGCA CGTACAATGC AAAAAGCTAT
GATTCATCGG GACACTTGAC CGCCAGTTCA AACTACACCG GCGACGGACA CTTGATCCAG
AACAACACCA TCTATATTCC CGGAAGTAGC GGCTTCCCTT CTGCTCAATT GTGGTGGGGG
TTCCAGATCT GA
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| Protein sequence | MYNAIIIAAE KSPFLAGELN AFGRDPDWEF VKGEANKGIF TDSSKKKIAF DPTWSESATL
FATTLAHELG HALLPGGTGG SLALNPDQAV ANGLSNEGVA LLSEYIVAIQ LGLTGGAAGH
MHSDQSDSRL TLQLNQLAQS VGIDVKSVTW GSAAAHALAD SDSALVDAAG KYYGTVHPSP
ALQLTYSQFY ADWWIIQHSG MDPNLVDWQK VQADMIKYTN FTLDGQPVFT IDTKGIPLLD
GGWAVVNGEI SLKGVVTKTL FNADGKIQEQ AKYDYTGFKF QNMLFGGDGK ATHRYDFKLD
NSYTKYDFAA DGSQTASLYG TTGQMIEYAK FNANGFKTLD IFYGADGNAT QQYNFNLDKS
YTKYDFNANG SQTATLYGVN GKITEYAKFN ADGFKTLDIF YGANGKAVQQ YNFNLDKSYT
KYDFAADGSQ TASLYGTTGQ MTEYAKFNAN GFKTLDIFYG ANGKATQQYN FNLDKSYTKY
DFAADGSQTA TLYGTTGQLT EYAKFNADGF KTLDIFYGAN GKAVQQYNFN LDKSYTKYDF
AADGSQTATL YGTTGQITEY AKFNANGNKT LDIFYGADGK ATQQYNFNLD KSYTKYDFAA
DGSQTATLYG TTGQLTEYAK FNANGFKTLD IFYGADGKAT QQYNFNLDKS YTKYDFAADG
SQTATLYGAA GQVTEYAKFN ANGNKTLDIF YGADGKATQQ YNFNLDKSYT KYDFNADGSQ
TATFFGVNGQ VSEYAKFNAA GVKTQDIVFG ADGKATKQID FNIDGSYASH VFNSDGSQFA
ALFGTNGQMT EYATFNAGGF KTQDIFYSNG RATHRYDFAL DKSFIAHVFD GSDEMVALFG
VNHIVYDYYK YSYGKLFERD IFDGLGRQIE ADRFSTSTGK LTGFSKFTYN SDGTYNAKSY
DSSGHLTASS NYTGDGHLIQ NNTIYIPGSS GFPSAQLWWG FQI
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