| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3575 |
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| Symbol | |
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| ID | 4312471 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 400469 |
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| End bp | 401296 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638151417 |
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| Product | peptidase M55, D-aminopeptidase |
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| Protein accession | YP_775463 |
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| Protein GI | 115358325 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2362] D-aminopeptidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00281601 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.133258 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATCC TGATTTCCAC CGACATCGAA GGTGTCGCCG GTGTGTTCGC CGTCGAGCAG
ACGCGGGCCG GCAATCCGGA GTACGAACGT GCGCGCCGCT GGATGACCGC CGAGGCGAAC
GCGGCGATCG AAGGTGCATT CGCGGGCGGC GCGCAGACCG TCTGGGTCAA CGACTCGCAT
GGCAGCTTTC GCAATCTGCT GCCCGACGGG CTCGATGCGC GTGCGCGCGT CGTGCTCGGC
AAGCCGCGCA CGCTCGGGAT GATGGCGGGC CTCGAACAGC AACCCGATCT CGTGTTCATG
ATCGGCTTTC ACGCGAAATC GCAGACGCAC GGCGTGCTCG CGCACACGAT CAACAATTTT
GCATTCACGC AGGTGTGGCT GAACGGCGTC GAACTCGGCG AGGCCGGGCT GTACGGCGCG
CTGGCGCGCG AATATGGCGC GCACGTCGCG CTGGCGTCGG GCGACGACGT GTTTGCGGAG
GAAACCCGGC CGCTGTTTCC GGACGCGCGT TTCGAGACGG TCAAGACGGC CCGCGGCGCA
TCGAGCGGCG ACACGCTCAC GCCGGCCGCG TCCTGCGCAC GCATCGCGAC CGCCGCACGC
GAAACGGTCG CGCACGCGCT GTTGTCCGGC TGGCGCGCAA CCGCGCATCG GCCCGCGCCG
GCCGCTTGCA CGTTGCGCGT GCAGACGGCC GCGCTCGCCG ATCTGTTCTG CATGCTGCCG
ACGCTCGAGC GCGTCGATGC GGTGACGTTG CGCTTCGACG GCCCGTCGGT CGAGCACGTG
GTGCGCACGT TGAACAGCCT GTCGGCCATG TCGTTCATGC TGCGGTGA
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| Protein sequence | MKILISTDIE GVAGVFAVEQ TRAGNPEYER ARRWMTAEAN AAIEGAFAGG AQTVWVNDSH
GSFRNLLPDG LDARARVVLG KPRTLGMMAG LEQQPDLVFM IGFHAKSQTH GVLAHTINNF
AFTQVWLNGV ELGEAGLYGA LAREYGAHVA LASGDDVFAE ETRPLFPDAR FETVKTARGA
SSGDTLTPAA SCARIATAAR ETVAHALLSG WRATAHRPAP AACTLRVQTA ALADLFCMLP
TLERVDAVTL RFDGPSVEHV VRTLNSLSAM SFMLR
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