Gene Bamb_3572 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_3572 
Symbol 
ID4312468 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp397569 
End bp398489 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content67% 
IMG OID638151414 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_775460 
Protein GI115358322 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.6122 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.137292 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAATT TTCTCGTCAA ACGCCTGTTC GGCCTGCTGC CCACGCTCGC GATGGTCGCG 
GTGTTGGTGT TCCTGTTCGT GCACCTGCTG CCGGGCGACC CGGCGCGGCT CGCGGCGGGC
CCCGAAGCCG ACGACGCGAC GGTCGCGCTG GTGCGCGCCG ATCTCGGCCT CGACCGGCCG
CTGCCCGCGC AGTTCGCGAA CTTCTTCGTG AAGATCGCGC ACGGCGATTT CGGCACGTCG
ACGCGCAGCA AGCGGCCGGT GTCGACCGAG ATCGGCGAGC GCTTCATGCC GACGCTGCTG
CTGACGCTCG TCAGCATGGT GTGGGCGACG GCGTTCGGGA TGGCGATCGG CATTGCGTCG
GCGGTGTGGC GCAACCGCTG GCCCGACCGC GTTGGGATGA CGATCGCGGT GTCGGGCATC
TCGTTTCCGG CGTTCGCGCT CGGCATGCTG CTGATGGAAA TCTTCTCGGT GAAGCTCGGC
TGGCTGCCCG TCGTGCCGGA CGGCACGTGG AAGAGCTACG TGCTGCCGTC GCTGACGCTC
GGCGCCGCGG TCGCGGCCGT GATGGCGCGC TTCACGCGCG CGTCGTTCGT CGAGGTGCTC
AACGAGGACT TCGTGCGTAC CGCGCGCGCG AAGGGCGTGC ACGAGCCGAT GGTCGTGCTC
AAGCACTGCC TGCGCAACGC GATGATCCCG GTCGTCACGA TGATGGGGCT GCAGTTCGGC
TTCCTGCTCG GCGGCTCGAT CGTCGTCGAG GCCGTGTTCA ACTGGCCGGG GCTCGGGCGC
CTGCTGGTCG ACGCGGTGAC GATGCGCGAC TACCCGGTGA TCCAGGCGAT CGTGCTGCTG
TTCTCGCTGG AATTCATCCT GATCAACCTG ACCGTCGACG TGCTGTACGC GGTCATCAAC
CCGACCATCC GGTTCAAGTG A
 
Protein sequence
MLNFLVKRLF GLLPTLAMVA VLVFLFVHLL PGDPARLAAG PEADDATVAL VRADLGLDRP 
LPAQFANFFV KIAHGDFGTS TRSKRPVSTE IGERFMPTLL LTLVSMVWAT AFGMAIGIAS
AVWRNRWPDR VGMTIAVSGI SFPAFALGML LMEIFSVKLG WLPVVPDGTW KSYVLPSLTL
GAAVAAVMAR FTRASFVEVL NEDFVRTARA KGVHEPMVVL KHCLRNAMIP VVTMMGLQFG
FLLGGSIVVE AVFNWPGLGR LLVDAVTMRD YPVIQAIVLL FSLEFILINL TVDVLYAVIN
PTIRFK