Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_3570 |
Symbol | |
ID | 4312466 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | + |
Start bp | 393907 |
End bp | 395808 |
Gene Length | 1902 bp |
Protein Length | 633 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638151412 |
Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
Protein accession | YP_775458 |
Protein GI | 115358320 |
COG category | [R] General function prediction only |
COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.15689 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTTCGA GCCGAACCCC GTCCGCGCTG GTGCTGCCGG ATCAGCGCGT CGTCGCCGTC GACGACCTGT CGGTCATGTT CCGTCGCGGC GCCGCGACGT TCGATGCGGT GCGCAACGTG TCGTTTCACG TCGATCGCGG CGAGACGCTC GCGATCGTCG GCGAATCGGG CTCCGGCAAG TCGGTCACGT CACTCGCGCT GATGCGGCTC GTCGAGCACG GCGGCGGCGA GATCACGAGC GGTCGGATCG CGTTGCGGCG TCGCGGCGGT GCGCTCGTCG ACCTCGCTCA GGCGAGCGCG GCGACGATGC GCGGGATCCG CGGCGCGGAC ATCGCGATGA TCTTCCAGGA ACCGATGACG TCGCTGAACC CGGTGTTTAC GGTCGGCGAC CAGATCAGCG AGGCGATCGC GCTGCACCAG TCGAAAAGCG CGACCGAAGC GCGCGCCGAA GCGTTGCGGC TGCTCGATCT CGTGCGCATC CCGGAGGCGC GCCGCGTGTT CGCGCGGTAT CCGCACCAGT TGTCCGGCGG GATGCGGCAG CGCGTGATGA TCGCGATGGC GCTATCGTGC CGGCCCGCGC TCCTGATCGC CGACGAGCCG ACGACCGCGC TCGACGTGAC GATCCAGGCG CAGATCCTGC AGCTGATCCG CGGGCTGCAG AACGAAATGA ACATGGGCGT GATCTTCATC ACGCACGACA TGGGCGTGGT CGCCGAAGTG GCCGACCGCG TGCTCGTGAT GTATCGGGGC GAGAAGGTCG AGGAGGGCGA GTCCGAGCGC ATTTTCGCGA CGCCCGCGCA TCGCTACACG CGTGCGCTGC TCGCGGCCGT GCCGCGGCTC GGCTCGATGC AGGGCACCGA TATCCCCGAG AAATTTCCGC TGCTGAAGGT GGACGCGACG GGCGCGGCCG CGCCGGCGCC TGCCGCGCAC GACTCCGCCG ACGCGCAGCC GCCGGTCGAT GCGGCCGCGC CGCCGATTCT GCGCGTGCGC GATCTCGTCA CGCGGTTTCC GGTGAAGAGC GGCGTGTTCA GCCGCGTGTC GCAGTACGTG CATGCGGTCG AGCGCGTGAG CTTCGAGCTG CGCGCGGGCG AGACGCTCGC GCTCGTCGGC GAATCGGGCT GCGGCAAGTC GACCACCGGG CGCTCGCTGC TGCGCCTCGT CGAATCGCAG AGCGGCTCGA TCGAATTCGA CGGCCGCGAC ATCAGCGCGA TGAAGGGCGC GGACCTGCAG GCGCTGCGCC GCAACATCCA GTTCATCTTC CAGGATCCGT TCGCGTCGCT GAACCCGCGC CTGACCGTCG GCTTCTCGAT CATGGAGCCG CTGCTCGTGC ACGGCGTCGC GAGCGGCCGC GAAGCGCAGG CGCGCGTCGA CTGGCTGCTG GACAAGGTCG GCCTGCCGCC GGAGGCCGCG CGCCGCTATC CGCACGAATT CTCGGGCGGC CAGCGCCAGC GGATCGCCAT CGCACGCGCG CTCGCGCTGA ACCCGAAGGT CGTGATCGCC GATGAATCGG TGTCCGCGCT CGACGTGTCG GTGCAGGCGC AGATCGTCAA CCTGATGCTC GACCTGCAGC GCGAGCTCGG CGTCGCGTAT CTGTTCATCT CGCACGACAT GGCGGTGGTC GAGCGCATCA GCCATCGCGT CGCGGTGATG TATCTCGGCC AGATCGTCGA GATCGGCCCG CGCCGCGCGG TGTTCGAGGC GCCGCAGCAT CCTTATACGA GGAAGCTGAT GAGCGCGGTG CCGGTGGCCG ACCCCGCGCG CCGGCATGCG CCGCGCCAGC TTGCGGCGGA CGAGATTCCG AGCCCGATCC GCGCGATCGG CGACGAGCCG ACGGTCGCGC CGCTCGTCGC GGTCGGCCCC GATCATTTCG TCGCGACGCA TCGCGTCGGC GGCGCGTATT GA
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Protein sequence | MTSSRTPSAL VLPDQRVVAV DDLSVMFRRG AATFDAVRNV SFHVDRGETL AIVGESGSGK SVTSLALMRL VEHGGGEITS GRIALRRRGG ALVDLAQASA ATMRGIRGAD IAMIFQEPMT SLNPVFTVGD QISEAIALHQ SKSATEARAE ALRLLDLVRI PEARRVFARY PHQLSGGMRQ RVMIAMALSC RPALLIADEP TTALDVTIQA QILQLIRGLQ NEMNMGVIFI THDMGVVAEV ADRVLVMYRG EKVEEGESER IFATPAHRYT RALLAAVPRL GSMQGTDIPE KFPLLKVDAT GAAAPAPAAH DSADAQPPVD AAAPPILRVR DLVTRFPVKS GVFSRVSQYV HAVERVSFEL RAGETLALVG ESGCGKSTTG RSLLRLVESQ SGSIEFDGRD ISAMKGADLQ ALRRNIQFIF QDPFASLNPR LTVGFSIMEP LLVHGVASGR EAQARVDWLL DKVGLPPEAA RRYPHEFSGG QRQRIAIARA LALNPKVVIA DESVSALDVS VQAQIVNLML DLQRELGVAY LFISHDMAVV ERISHRVAVM YLGQIVEIGP RRAVFEAPQH PYTRKLMSAV PVADPARRHA PRQLAADEIP SPIRAIGDEP TVAPLVAVGP DHFVATHRVG GAY
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