Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_3566 |
Symbol | |
ID | 4312462 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | - |
Start bp | 390207 |
End bp | 391538 |
Gene Length | 1332 bp |
Protein Length | 443 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638151408 |
Product | major facilitator transporter |
Protein accession | YP_775454 |
Protein GI | 115358316 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | [TIGR00893] d-galactonate transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000684429 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.364964 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAAGA CTGAGCAAGG CGCCCCAGCC GGGCGGATTT GCATGAATCA GGAGACAGCA GTGAAGACAG TCAAGGCGTT GCGCTGGTGG ATCATCGTGC TGGTATGTCT GGGCACGATC CTCAACTATC TCGCACGAAA TTCCCTCGCG GTGCTCGCAC CGGAACTGAA GCACGTGTTC GCGATCTCGA CGCAGCAGTA CTCATACATC GTCGGCGCGT TCCAGATCGG CTACACGATC ATGCAGCCGG TGTGCGGATT CATCGTCGAC CTGATCGGGC TGCGGCTCGG GTTCGCGCTG TTCGCGATGC TGTGGTCGGT GGTCGGCGTC GCGCACGGCT TCGCGTCGGG CTGGCTGTCG CTCGGCATTC TGCGCGGCCT GCTCGGGCTG TTCGAGGCCG CGGCGATTCC GTCGGGTATG AAGGCCGTCG CCGAATGGTT TCCCGATCGC GAGAAATCCG TCGCGGTCGG CTACTTCAAC GCTGGCACGT CGCTCGGCGC CGCGATCGCG CCGCCGCTCG TCGTGTTCCT GTCGATGCGG TTCGGCTGGC AATCCGCGTT CATGGTCACC GGCGCGCTTG GCTTCGCGTG GGCCGTGCTC TGGTACACGC AGTACCGGTC GCCGGCCGAG CATCCGCGCA TCTCGTCGCA GGAGCGCACG CTGATCAGTG ACGGCCAGGC CAGGATGCCG GCCGTGTCGA AGCGCCGGAT TCGCGACGTC GTCACCGCGC GCCGCTTCTG GGCGATCGCG CTGCCGCGCT TCTTCGCGGA ACCGGCATGG CAGACCTTCA GCTTCTGGAT TCCGCTGTAT CTCGCGACCG AACGCCACAT GGCGCTCACG GAGATCGCCA TCTTCGCGTG GATGCCGTTC CTCGCGGCGG ACCTCGGCGG CATCGCCGGC GGCTACCTGT CGCCCTACCT CGCGAAACGG TTCAGTCTGC CGCTCGTGTG GTCGCGGGTC GCGGGCGTCG CGCTCGGCGC GGTGCTGATG CTCGGGCCGG CGACGATCGG GCTCGTGTCG TCGCCGTACA CGGCCATTGC GCTGTTCTGC GTCGGCGGCT TTGCGCACCA GATGATCTCC GCGCTCGTCA ACACGCTGTC GGCCGATGTG TTCGACTCCG AGGAAGTCGG CACCGCGAGC GGCTTCGCGG GAATGGCCGC GTGGATCGGC GGGCTCGGCT TCTCGCTGCT CGTCGGCGCG CTCGCCGACA AGATCGGCTA CGCGCCGCTG TTCGCGTGCC TCGGCCTGTT CGACATCATC GGCGTCACGC TGCTCGCGGT GCTGATCCGC GGGCAGTCGA AGCAGGAACG CCTGCTCGCG CAGCATGCCT GA
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Protein sequence | MNKTEQGAPA GRICMNQETA VKTVKALRWW IIVLVCLGTI LNYLARNSLA VLAPELKHVF AISTQQYSYI VGAFQIGYTI MQPVCGFIVD LIGLRLGFAL FAMLWSVVGV AHGFASGWLS LGILRGLLGL FEAAAIPSGM KAVAEWFPDR EKSVAVGYFN AGTSLGAAIA PPLVVFLSMR FGWQSAFMVT GALGFAWAVL WYTQYRSPAE HPRISSQERT LISDGQARMP AVSKRRIRDV VTARRFWAIA LPRFFAEPAW QTFSFWIPLY LATERHMALT EIAIFAWMPF LAADLGGIAG GYLSPYLAKR FSLPLVWSRV AGVALGAVLM LGPATIGLVS SPYTAIALFC VGGFAHQMIS ALVNTLSADV FDSEEVGTAS GFAGMAAWIG GLGFSLLVGA LADKIGYAPL FACLGLFDII GVTLLAVLIR GQSKQERLLA QHA
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