Gene Bamb_3535 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_3535 
Symbol 
ID4312431 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp354316 
End bp356001 
Gene Length1686 bp 
Protein Length561 aa 
Translation table11 
GC content66% 
IMG OID638151377 
Productphosphoenolpyruvate phosphomutase 
Protein accessionYP_775423 
Protein GI115358285 
COG category[M] Cell wall/membrane/envelope biogenesis
[G] Carbohydrate transport and metabolism 
COG ID[COG1213] Predicted sugar nucleotidyltransferases
[COG2513] PEP phosphonomutase and related enzymes 
TIGRFAM ID[TIGR02320] phosphoenolpyruvate phosphomutase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.268372 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCTC GCGAACCCAA CTTCTCCGAA TCGCGCAGCG CACGCCTGCG CCGCATGCTC 
GTCAGCAACG AACTCGAATT CCTGATGGAA GCGCACAACG GCCTGTCCGC ACGGATCGTC
CGCGAAGCAG GCTTCAAGGG GATCTGGGCA TCGGGCCTCG CGATCTCCGC GCAGTTCGGC
GTGCGCGACA ACAACGAAGC GAGCTGGACG CAGGTCGTCG ACGTGCTCGA GTTCATGGCT
GACGCAAGCG ACCTGCCGAT CCTGCTCGAC GGCGACACCG GCTACGGCAA CTTCAACAAC
GTGCGCCGCC TCGTGAAGAA GCTCGAGCAG CGCGGCATCG CCGGCGTGTG CATCGAGGAT
AAACAATTCC CGAAGACGAA CAGCTTCATC GGCGGCGAAC GCCAGCCGCT CGCGGAAATC
GACGAGTTCT GCGGCAAGAT CAAGGCCGGC AAGGATTCGC AGAGCGACTC CGACTTCTCG
ATCGTCGCGC GCGTCGAGGC GCTGATCGCG GGCTGGGGGA TGGACGAGGC GCTGCGCCGC
GCGAACGCGT ATGCGGAAGC CGGTGCGGAC GCGATCCTGA TCCACAGCAA GCTGTCGCGC
CCGGACGAAA TTCTCCAGTT CGCACGCGAA TGGAGCGGCA AGGCGCCGCT CGTGATCGTG
CCGACCAAGT ACTACAGCAC GCCGACCGAC GTGTTCCGCC AGGCCGGCAT CAGCACCGTG
ATCTGGGCGA ACCACCTGAT CCGCGCATCG GCATCGGCGA TGCAGGCCGT CGCACGCGAG
ATTCATGAAA ACGAGACGCT GATCAACGTC GAGGACCGCG TCGCGTCCGT CAACGAGATC
TTCCGCCTGC AGGACGCCGA CGAATACTCG GCAGCCGAGC GTATCTACCT GTCGTCGTCG
TCGCGCGCGT CGAACGCCGC GATCGTGCTC GCCGCGAGCC GCGGCAAGGG ACTCGAGGCC
GTGACCGAAG ATAAGCCCAA GGTCATGCTG CCGGTCGCCG GCAAGCCGCT GCTGCGCTGG
CTCGTCGACG GCTTCAAGAC GCACGGCGTG AACGACATCA CCGTGGTCGG CGGCTATCGC
GCCGACGCGA TCGACACGTC GGGCATCAAG CTCGTCGTCA ACGAGCGTCA CGCGCAGACG
GGCGAGCTCG CATCGCTCGC GTGCGCGGCC GAACGTCTGA CCGGCGACAC CGTGATCTCG
TACGGTGACC TGCTGTTCCG CAGCTACATC GTGCGCGACC TCGCGGAGAG CGAGGCCGAG
TTCAGCGTCG TCGTCGACTC GTCGCTCACG GAGACCAACC AGAGCGTGCG CGATTTCGCG
CTTTGCTCGG CCGCCGACGA CCGCGGCCTG TTCGGCCAGA AAACCTACCT GCAACGCGTA
TCGAGCGACG TCGCCGCAGG CACGCCGCAC GGCCGCTGGA TCGGTCTGTT GAACGTGCGC
GGCGCAGGCG TCGACCGCCT GAAGGCGATG CTCGCGACGC TGCAGGCACG TCCTGATTTC
GACACGCTCG ATATCCCGTC GCTGCTCAAC GAACTGATCG CCGCCGGCGA GAAGATCGAG
GTGCAGTACG TGCACGGCCA CTGGCGCGGC GTCAACGATC TCGAAGACTT CCGCCGCGCG
GGCGACTTCG CGCACGGCCA GACGCCGCTG TCCGAGCCGA GCACCGGCAA CGGGGGCGCG
CAATGA
 
Protein sequence
MNAREPNFSE SRSARLRRML VSNELEFLME AHNGLSARIV REAGFKGIWA SGLAISAQFG 
VRDNNEASWT QVVDVLEFMA DASDLPILLD GDTGYGNFNN VRRLVKKLEQ RGIAGVCIED
KQFPKTNSFI GGERQPLAEI DEFCGKIKAG KDSQSDSDFS IVARVEALIA GWGMDEALRR
ANAYAEAGAD AILIHSKLSR PDEILQFARE WSGKAPLVIV PTKYYSTPTD VFRQAGISTV
IWANHLIRAS ASAMQAVARE IHENETLINV EDRVASVNEI FRLQDADEYS AAERIYLSSS
SRASNAAIVL AASRGKGLEA VTEDKPKVML PVAGKPLLRW LVDGFKTHGV NDITVVGGYR
ADAIDTSGIK LVVNERHAQT GELASLACAA ERLTGDTVIS YGDLLFRSYI VRDLAESEAE
FSVVVDSSLT ETNQSVRDFA LCSAADDRGL FGQKTYLQRV SSDVAAGTPH GRWIGLLNVR
GAGVDRLKAM LATLQARPDF DTLDIPSLLN ELIAAGEKIE VQYVHGHWRG VNDLEDFRRA
GDFAHGQTPL SEPSTGNGGA Q