| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3484 |
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| Symbol | |
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| ID | 4312380 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 286100 |
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| End bp | 287398 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638151326 |
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| Product | hypothetical protein |
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| Protein accession | YP_775372 |
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| Protein GI | 115358234 |
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| COG category | [N] Cell motility
[S] Function unknown |
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| COG ID | [COG1360] Flagellar motor protein
[COG3455] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03349] type IV / VI secretion system protein, DotU family
[TIGR03350] type VI secretion system OmpA/MotB family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0805528 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.565487 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGATC GTGCGAAATA TCTGGGTGGC CAGAAGGAGG ACGTATCGGT TCCCGTCGAT
GCTCCAACGT TTGCCGATAC CGTCGACCCC GATCGAAACC AGAAGACTTA CGTCATCCCG
CCGGGAAAAG TGGAATCGCT GCGACTGAAT GCAATTCTGG CAGCACGGAA CCCGTTGCTC
GAGGCATCGC GTGTGCTGCT GCGTGCGCAG GCCGACATGC CCGAGACGTT TGAGTCGAGA
GATGCGGTCG TGCTGTTGCG TAGGCTTCTC GTGGAGGAGG TTCGCGTATT CGACAGGCTT
TGCGAGCAAG CAAACATCCG GCGCGATCAT ATGATCGGCG CGAGCTACTG CCTGTGCACG
GCACTCGACG AAGCGGTAGC GCAAACCGCA TGGGGCAAGG AGGGCTCGTC GGCGATCGAA
TGGATCCAAG GAGGGCTTGC GACCACTTTT CACGGAGACC TCAAGGGCGG CGACAAGGTC
TACCTGTTGA TCGGCCGCTT GCTGGAGGAC CCTCACGAGC ATCGTGAACT CCTGGAAGTA
ATTTACCGGA TTCTCAGCCT CGGTTTCGAA GGTCGCTACC GAGGCGTGAC CGACGGCAAG
CGCAAGCACG ACGGGATTCG TCAGCGGCTC TACAACGTGA TCACGTCGCA GCGCGAACCG
GTGCCGCTGG CGCTATCGCC TCACTGGCAA TCGACCGCGA AAGGCAAGCG CCTGTCGTTC
ACCGATTTTC CGGTATGGAT CACCGTCACC GTCCTGTCGG TGATCCTGCT CGGATTGTTC
GGCTGGTTCA AGTACGAACT GGTCAGCCGT AGCGCGGACG TTCAGAAACA GATTGCCGAC
ATCGCCCGCA TGACGCCGCC TCCCGCGCCG CCGCAACTGC ACCTCAAGCA ATTGCTCCAG
GATGAAATCG CCGCCGGCAC CGTCAGTGTC GACGAAGACG CTCGCCACAG CGCCGTCACG
TTCCGCGGAG ACGCGATGTT CAAGCCCGGC GGCGCTTCGG TTCAGGCATC GATGAATCCG
CTGATTGCGA AGATCGCCAC TGAGATCGCC AAGGTGCCGG GCAAGGTAAC GATCATCGGC
TATACAGACA AGGTGCCGAT TCGCAGCCGG CATTTCGCAT CGAATCAGGT GCTGTCGGAA
GAGCGCGCCA CCCAGGTCAT GCAGATGCTG CAAGCCGCTG GGGTGCCGGC AAACCGTCTC
GAAGCCGTCG GCAAAGGCGA TGCCCATCCG GTCGGCGACA ACCGCACCGC GCAGGGCCGT
GCGCAAAACC GTCGCGTCGA AATCGACGTC GCACGATAA
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| Protein sequence | MMDRAKYLGG QKEDVSVPVD APTFADTVDP DRNQKTYVIP PGKVESLRLN AILAARNPLL
EASRVLLRAQ ADMPETFESR DAVVLLRRLL VEEVRVFDRL CEQANIRRDH MIGASYCLCT
ALDEAVAQTA WGKEGSSAIE WIQGGLATTF HGDLKGGDKV YLLIGRLLED PHEHRELLEV
IYRILSLGFE GRYRGVTDGK RKHDGIRQRL YNVITSQREP VPLALSPHWQ STAKGKRLSF
TDFPVWITVT VLSVILLGLF GWFKYELVSR SADVQKQIAD IARMTPPPAP PQLHLKQLLQ
DEIAAGTVSV DEDARHSAVT FRGDAMFKPG GASVQASMNP LIAKIATEIA KVPGKVTIIG
YTDKVPIRSR HFASNQVLSE ERATQVMQML QAAGVPANRL EAVGKGDAHP VGDNRTAQGR
AQNRRVEIDV AR
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