| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3478 |
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| Symbol | |
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| ID | 4312374 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 277252 |
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| End bp | 278595 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638151320 |
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| Product | hypothetical protein |
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| Protein accession | YP_775366 |
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| Protein GI | 115358228 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3522] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03353] type VI secretion protein, VC_A0114 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.486884 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTGGT ACGCCAAGGT CGCCTGGCAG GAGGGGCTGT TCTTCCGTCC GCAGCTGTTC
CAACAGCAGG ATCGCTATTT CGAGAAATAC GCGCATCAGC GCGCGGCGCC GCTGTCGCCG
TTCTTTTTCG GTTTCACGCA CTTCGCGCTC GACCACGAGG CGCTTGCGCT CGGCAAGGTG
GTTGTCAAGG CGGCCGCGGG CGTGTTTGCC GACGGCACGC CGTTCGATGC GCCGGGCAAC
ACGCCGTTGC CGCCGCCGCT GACGATCCGG CCCGAACATC TGGACCAGGT GATCTATCTG
GCCGTACCCG TCCGGTTGCC GAATTGTGAG GAGACCACCT TCGACGAAAC CCCGGATTCG
CTCGCACGCT ATCAGGTGTT CGACACCGAA TTGCGTGACA CGAATTCGAT GGGTCTTGCC
CCCGAATCGG TGCAGTTGTC GAACCTGCGC GTGCGTCTGC TGCCGGAAAA GGAGCTGGGC
GATGCCTGGA TCGGTCTCGC GCTCACGCGT GTGACGACGA TTCGCGCGGA TGGCAGCATC
GCGCTCGACG ACACGCTCGT GCCGCCGGTA TCCGGTTACG GCGCAAGCGA CCTGCTGACA
AGCTGGGTCA CGAAAATTCA TGATCTCGCG CGCCTGCGCG CGAATGCGCT TGCGCAGCGG
CTCGCCGGTA CCGACGACAC GACCGCAAGC GCGGCGACAG TTACCGATTA CCTGCTGCTG
CAGATCCTGA ACCGCTACGA GCCGCTTCTG CAGCATCTGC TGCGTGTGCC GGCGACGTCG
CCGGCTGACG TGTATGCGCT GCTGATCGGC ATGGCGGGGG AGTTGTCGAC GCATTTGCGC
ACCAACACGC GCCGGCCACT CGATACGCAC CCGCCGTATC AGCATACGAC GCCGCACGTG
TGCCTGAAGC CGGTCGTCGA CGACACGCAT CGCCTGCTCA ACGCCGTGCT GGTGCGCAGC
GCGCAGAGCA TCGTGCTCGA GGATCGCGGT CACGGCATGC GTAACGCGGT GGTCGATCCG
GTCGATATGC AAGGGTTCGC CGCACTGGTG CTGGCCGTGC ATGCGGCGAT GCCGCAGGAT
GTACTGCAAC AGCAGTTTCT TGCGCAGGCG AAGGCGGGGC CTTCGGACAA GCTGCCTAGC
CTGGTGCGCA GTCACTTGCC GGGCATCGGC CTGCAGGCGC TGCCGGTGCC GCCGCGGCAG
ATTCCGTTCA ACGCGGGCTA CATCTATTAC GAGCTGACCC AGGGTGGACT GCTTTGGGAG
GAAGTCGTGC GGCATGGTGG CATCGCATTG CATGTGTCGG GAGAGTTCCC GTCATTGAGG
CTTGAGTTAT GGGGCGTGCG CTGA
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| Protein sequence | MSWYAKVAWQ EGLFFRPQLF QQQDRYFEKY AHQRAAPLSP FFFGFTHFAL DHEALALGKV
VVKAAAGVFA DGTPFDAPGN TPLPPPLTIR PEHLDQVIYL AVPVRLPNCE ETTFDETPDS
LARYQVFDTE LRDTNSMGLA PESVQLSNLR VRLLPEKELG DAWIGLALTR VTTIRADGSI
ALDDTLVPPV SGYGASDLLT SWVTKIHDLA RLRANALAQR LAGTDDTTAS AATVTDYLLL
QILNRYEPLL QHLLRVPATS PADVYALLIG MAGELSTHLR TNTRRPLDTH PPYQHTTPHV
CLKPVVDDTH RLLNAVLVRS AQSIVLEDRG HGMRNAVVDP VDMQGFAALV LAVHAAMPQD
VLQQQFLAQA KAGPSDKLPS LVRSHLPGIG LQALPVPPRQ IPFNAGYIYY ELTQGGLLWE
EVVRHGGIAL HVSGEFPSLR LELWGVR
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