Gene Bamb_3473 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_3473 
Symbol 
ID4312369 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp271254 
End bp273947 
Gene Length2694 bp 
Protein Length897 aa 
Translation table11 
GC content65% 
IMG OID638151315 
ProductATPase 
Protein accessionYP_775361 
Protein GI115358223 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0542] ATPases with chaperone activity, ATP-binding subunit 
TIGRFAM ID[TIGR03345] type VI secretion ATPase, ClpV1 family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.150348 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.618015 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATTT CACGCCAGGC TCTGTTCGGC AAGCTCGGGG TTCAGCTCTA CCGCAGCATC 
GAATCGGCGA CACAGTTCTG CAAGTTGCGC GGCAATCCGT ACGTGGAGCT CATTCACTGG
TTGCATCAGC TCCTGCAGCA ACCCGATAGC GACCTGCATC GCATCCTGCG GCACGCGGGC
ATCGAGCGCG ACGTGCTCGA TCGCGACTTC GCGCGGGCGT TGGCGGTGCT GCCGGCCGGT
GCCAGTTCAA TCAGCGACTT TTCCTGGCAC ATCGAGACAG CGATCGAACG CGCGTGGGTT
CTCGCGACGC TAAGTCATGG CGATCGCCGT GTGCGCGGCG CGTGGCTCGT TGCTGCGCTT
GTCTCGACGC CCGAGTTGAG GCGTGTTCTG CTGTCGATCT CTCCCGCGTT CGGCAAGATC
CCTGTCGACG GGCTGGGCGA TGAGCTGCCG GCATGGATCG ACGGATCGCC TGAAGCCGCC
GATGCGCCGT ACGACCACAG CGACCTTTCG GCGGCAACAC CGGGCGAGGC GTCCGGCGCG
ATTCCAGTCG CATCGAAGCG TGGTTCGCTC GACCAGTATT GCGCTGACCT GACAGCGCTC
GCTCGCATGG GCGAGATCGA TCCGGTCATC GGCCGCGAAC TCGAGATTCG CACGATGATC
GACGTGCTGC TGCGCCGTCG GCAGAACAAC CCGTTGGTGA CGGGTGAGGC CGGTGTTGGC
AAGACGGCCG TCGTGGAAGG GTTGGCGCGC GCGATCGCAT CGGGCAATGT GCCGCCGAAG
CTTGCCGATG TGCGGCTGCT GTCGCTCGAC GTCGGCGCAT TGCTCGCCGG CGCGAGCATG
AAGGGGGAGT TCGAAGCGCG TCTGAAAGGG CTGCTCGAAG CCGCTGGAAA ATCGCCGACG
CCGGTGATCC TCTTCATCGA CGAGATTCAC ACCCTGATCG GCGCGGGCGG CCAGGCGGGC
ACGGGCGATG CCGCCAATCT GCTGAAACCC GCGCTTGCGC GGGGGACGAT CCGTACGATC
GGCGCGACGA CCTGGGCCGA GTACAAGCGT CACATCGAGA AGGATCCGGC GCTCACGCGA
CGCTTCCAGG TGCTGCAGAT CGCCGAGCCG TCCGAGGCTG CTGCCATCGA TATGGTGCGC
GGGCTTGTGC AAACGTTTTC TCGACATCAC GGCGTCGTGG TGCTCGACGA AGCGATCCGT
GCGGCGGTGA CGCTGTCACA CCGGTATATC CCATCGCGTC AGTTGCCGGA CAAGGCCATC
AGCCTGCTCG ACACCGCCTG TGCACGTGTG GCGCTGTCGC AGCATGCCAC GCCGCGTGAA
CTGGACGACG TGCGTCAGCG TCTTGCGGCC GCGCGTGCCG AGGAGGCGTT GCTCGTGCAG
GAAGCCCGTA TCGGCCTGGA TACCGACAGG GCGTTGACGG GCGTGCGAGC GCGCATCGAT
ACATTGGGGG CCGAAGCGGC TGCGGTCGAG CATCGCTGGC GCGCTCAGGC CGCCGCCGCG
CAGGCGTTGC TGGCCGCGCG CGAGGCCATT GGACCCGACG ACGGCAAAAC CCCGCGGGAC
GAGGTGGCGG CGCTTCCGAA GCTGCGCGAA CTCGAACACG CGCTCGTTGC GCTGCAAGGC
GATGCGCCGC TCGTATTCCC CGAGGTCGAC GAGGCGATCG TCGCGGAAAT CGTATCCGAT
TGGACCGGCA TCCCTGTTGG CCGGATGGTG ACTGATGAGG TCGCCGCGGT GCGCAAGTTG
CCCGAGACGC TCGAGGCACG CGTGATTGGC CAGACCAACG CGCTACGTCA AATTGGCGAA
CGTGTGCAGA CCGCACGCGC AGGCCTCACG GACCCGAGGA AACCGGTCGG CGTGTTCCTG
CTCGCCGGTC CGTCGGGCGT CGGCAAGACT GAAACCGCGC TGGCGCTGGC CGAAGCGCTG
TACGGCGGTG AACAGAACCT GATCACGATC AACATGAGCG AGTATCAGGA GGCACACACC
GTTTCGGGCC TGAAAGGGGC TCCGCCGGGG TATGTCGGCT ACGGCGAGGG CGGGGTGCTG
ACCGAGGCGG TGCGCCGCCG TCCGTATTCG GTCGTACTGC TCGACGAGAT CGAGAAGGCC
CACCGCGACG TGCACGAGAT GTTCTTCCAG GTATTCGACA AGGGCTACAT GGAGGACGGC
GACGGCCGCT ACATTGATTT CCGCAATACG ACGATCCTGC TCACGAGCAA CGTCGGTTCC
GAACTGAGTA CGAGTCTCTG CGCCGATCCG TCGCTCGCGC CGAATCAGGA TGGCCTGCGG
GAAGCACTGA CGCCCGAACT ACTCAAGGTT TTCCCGGCGG CATTCCTCGG GCGCGTGACC
GTCGTGCCCT ACCGGCCACT TGCCGACAGC GTACTCGCCA GCATCGTCCG CCTGTATCTG
GAGCGCATCG TCAAGCGTAT GGCCGACGGC CACGGCATCG CGCTGACGTA TGACGACGCG
GTCGTCAATT ACATCATCGG CCGCTGTCTC GTGCAGGAGA CCGGTGCGCG CGTGCTGATC
GGATTTATCG AGCAGCACGT ATTGCCGCGA CTGTCCGCAC TATGGCTCGA CGCCTTCGCT
TCGAAACGGA CACTGTCGCA CATCGTGATC GGCGTGGCGG ATCCGTCCTG CATGCCGGCG
CAGGCACTCT CGTTTGACGC GATCGCCTTC CATTCAGACG AGCCGGTTCT CTGA
 
Protein sequence
MTISRQALFG KLGVQLYRSI ESATQFCKLR GNPYVELIHW LHQLLQQPDS DLHRILRHAG 
IERDVLDRDF ARALAVLPAG ASSISDFSWH IETAIERAWV LATLSHGDRR VRGAWLVAAL
VSTPELRRVL LSISPAFGKI PVDGLGDELP AWIDGSPEAA DAPYDHSDLS AATPGEASGA
IPVASKRGSL DQYCADLTAL ARMGEIDPVI GRELEIRTMI DVLLRRRQNN PLVTGEAGVG
KTAVVEGLAR AIASGNVPPK LADVRLLSLD VGALLAGASM KGEFEARLKG LLEAAGKSPT
PVILFIDEIH TLIGAGGQAG TGDAANLLKP ALARGTIRTI GATTWAEYKR HIEKDPALTR
RFQVLQIAEP SEAAAIDMVR GLVQTFSRHH GVVVLDEAIR AAVTLSHRYI PSRQLPDKAI
SLLDTACARV ALSQHATPRE LDDVRQRLAA ARAEEALLVQ EARIGLDTDR ALTGVRARID
TLGAEAAAVE HRWRAQAAAA QALLAAREAI GPDDGKTPRD EVAALPKLRE LEHALVALQG
DAPLVFPEVD EAIVAEIVSD WTGIPVGRMV TDEVAAVRKL PETLEARVIG QTNALRQIGE
RVQTARAGLT DPRKPVGVFL LAGPSGVGKT ETALALAEAL YGGEQNLITI NMSEYQEAHT
VSGLKGAPPG YVGYGEGGVL TEAVRRRPYS VVLLDEIEKA HRDVHEMFFQ VFDKGYMEDG
DGRYIDFRNT TILLTSNVGS ELSTSLCADP SLAPNQDGLR EALTPELLKV FPAAFLGRVT
VVPYRPLADS VLASIVRLYL ERIVKRMADG HGIALTYDDA VVNYIIGRCL VQETGARVLI
GFIEQHVLPR LSALWLDAFA SKRTLSHIVI GVADPSCMPA QALSFDAIAF HSDEPVL