Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_3473 |
Symbol | |
ID | 4312369 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | + |
Start bp | 271254 |
End bp | 273947 |
Gene Length | 2694 bp |
Protein Length | 897 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 638151315 |
Product | ATPase |
Protein accession | YP_775361 |
Protein GI | 115358223 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
TIGRFAM ID | [TIGR03345] type VI secretion ATPase, ClpV1 family |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.150348 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.618015 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGATTT CACGCCAGGC TCTGTTCGGC AAGCTCGGGG TTCAGCTCTA CCGCAGCATC GAATCGGCGA CACAGTTCTG CAAGTTGCGC GGCAATCCGT ACGTGGAGCT CATTCACTGG TTGCATCAGC TCCTGCAGCA ACCCGATAGC GACCTGCATC GCATCCTGCG GCACGCGGGC ATCGAGCGCG ACGTGCTCGA TCGCGACTTC GCGCGGGCGT TGGCGGTGCT GCCGGCCGGT GCCAGTTCAA TCAGCGACTT TTCCTGGCAC ATCGAGACAG CGATCGAACG CGCGTGGGTT CTCGCGACGC TAAGTCATGG CGATCGCCGT GTGCGCGGCG CGTGGCTCGT TGCTGCGCTT GTCTCGACGC CCGAGTTGAG GCGTGTTCTG CTGTCGATCT CTCCCGCGTT CGGCAAGATC CCTGTCGACG GGCTGGGCGA TGAGCTGCCG GCATGGATCG ACGGATCGCC TGAAGCCGCC GATGCGCCGT ACGACCACAG CGACCTTTCG GCGGCAACAC CGGGCGAGGC GTCCGGCGCG ATTCCAGTCG CATCGAAGCG TGGTTCGCTC GACCAGTATT GCGCTGACCT GACAGCGCTC GCTCGCATGG GCGAGATCGA TCCGGTCATC GGCCGCGAAC TCGAGATTCG CACGATGATC GACGTGCTGC TGCGCCGTCG GCAGAACAAC CCGTTGGTGA CGGGTGAGGC CGGTGTTGGC AAGACGGCCG TCGTGGAAGG GTTGGCGCGC GCGATCGCAT CGGGCAATGT GCCGCCGAAG CTTGCCGATG TGCGGCTGCT GTCGCTCGAC GTCGGCGCAT TGCTCGCCGG CGCGAGCATG AAGGGGGAGT TCGAAGCGCG TCTGAAAGGG CTGCTCGAAG CCGCTGGAAA ATCGCCGACG CCGGTGATCC TCTTCATCGA CGAGATTCAC ACCCTGATCG GCGCGGGCGG CCAGGCGGGC ACGGGCGATG CCGCCAATCT GCTGAAACCC GCGCTTGCGC GGGGGACGAT CCGTACGATC GGCGCGACGA CCTGGGCCGA GTACAAGCGT CACATCGAGA AGGATCCGGC GCTCACGCGA CGCTTCCAGG TGCTGCAGAT CGCCGAGCCG TCCGAGGCTG CTGCCATCGA TATGGTGCGC GGGCTTGTGC AAACGTTTTC TCGACATCAC GGCGTCGTGG TGCTCGACGA AGCGATCCGT GCGGCGGTGA CGCTGTCACA CCGGTATATC CCATCGCGTC AGTTGCCGGA CAAGGCCATC AGCCTGCTCG ACACCGCCTG TGCACGTGTG GCGCTGTCGC AGCATGCCAC GCCGCGTGAA CTGGACGACG TGCGTCAGCG TCTTGCGGCC GCGCGTGCCG AGGAGGCGTT GCTCGTGCAG GAAGCCCGTA TCGGCCTGGA TACCGACAGG GCGTTGACGG GCGTGCGAGC GCGCATCGAT ACATTGGGGG CCGAAGCGGC TGCGGTCGAG CATCGCTGGC GCGCTCAGGC CGCCGCCGCG CAGGCGTTGC TGGCCGCGCG CGAGGCCATT GGACCCGACG ACGGCAAAAC CCCGCGGGAC GAGGTGGCGG CGCTTCCGAA GCTGCGCGAA CTCGAACACG CGCTCGTTGC GCTGCAAGGC GATGCGCCGC TCGTATTCCC CGAGGTCGAC GAGGCGATCG TCGCGGAAAT CGTATCCGAT TGGACCGGCA TCCCTGTTGG CCGGATGGTG ACTGATGAGG TCGCCGCGGT GCGCAAGTTG CCCGAGACGC TCGAGGCACG CGTGATTGGC CAGACCAACG CGCTACGTCA AATTGGCGAA CGTGTGCAGA CCGCACGCGC AGGCCTCACG GACCCGAGGA AACCGGTCGG CGTGTTCCTG CTCGCCGGTC CGTCGGGCGT CGGCAAGACT GAAACCGCGC TGGCGCTGGC CGAAGCGCTG TACGGCGGTG AACAGAACCT GATCACGATC AACATGAGCG AGTATCAGGA GGCACACACC GTTTCGGGCC TGAAAGGGGC TCCGCCGGGG TATGTCGGCT ACGGCGAGGG CGGGGTGCTG ACCGAGGCGG TGCGCCGCCG TCCGTATTCG GTCGTACTGC TCGACGAGAT CGAGAAGGCC CACCGCGACG TGCACGAGAT GTTCTTCCAG GTATTCGACA AGGGCTACAT GGAGGACGGC GACGGCCGCT ACATTGATTT CCGCAATACG ACGATCCTGC TCACGAGCAA CGTCGGTTCC GAACTGAGTA CGAGTCTCTG CGCCGATCCG TCGCTCGCGC CGAATCAGGA TGGCCTGCGG GAAGCACTGA CGCCCGAACT ACTCAAGGTT TTCCCGGCGG CATTCCTCGG GCGCGTGACC GTCGTGCCCT ACCGGCCACT TGCCGACAGC GTACTCGCCA GCATCGTCCG CCTGTATCTG GAGCGCATCG TCAAGCGTAT GGCCGACGGC CACGGCATCG CGCTGACGTA TGACGACGCG GTCGTCAATT ACATCATCGG CCGCTGTCTC GTGCAGGAGA CCGGTGCGCG CGTGCTGATC GGATTTATCG AGCAGCACGT ATTGCCGCGA CTGTCCGCAC TATGGCTCGA CGCCTTCGCT TCGAAACGGA CACTGTCGCA CATCGTGATC GGCGTGGCGG ATCCGTCCTG CATGCCGGCG CAGGCACTCT CGTTTGACGC GATCGCCTTC CATTCAGACG AGCCGGTTCT CTGA
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Protein sequence | MTISRQALFG KLGVQLYRSI ESATQFCKLR GNPYVELIHW LHQLLQQPDS DLHRILRHAG IERDVLDRDF ARALAVLPAG ASSISDFSWH IETAIERAWV LATLSHGDRR VRGAWLVAAL VSTPELRRVL LSISPAFGKI PVDGLGDELP AWIDGSPEAA DAPYDHSDLS AATPGEASGA IPVASKRGSL DQYCADLTAL ARMGEIDPVI GRELEIRTMI DVLLRRRQNN PLVTGEAGVG KTAVVEGLAR AIASGNVPPK LADVRLLSLD VGALLAGASM KGEFEARLKG LLEAAGKSPT PVILFIDEIH TLIGAGGQAG TGDAANLLKP ALARGTIRTI GATTWAEYKR HIEKDPALTR RFQVLQIAEP SEAAAIDMVR GLVQTFSRHH GVVVLDEAIR AAVTLSHRYI PSRQLPDKAI SLLDTACARV ALSQHATPRE LDDVRQRLAA ARAEEALLVQ EARIGLDTDR ALTGVRARID TLGAEAAAVE HRWRAQAAAA QALLAAREAI GPDDGKTPRD EVAALPKLRE LEHALVALQG DAPLVFPEVD EAIVAEIVSD WTGIPVGRMV TDEVAAVRKL PETLEARVIG QTNALRQIGE RVQTARAGLT DPRKPVGVFL LAGPSGVGKT ETALALAEAL YGGEQNLITI NMSEYQEAHT VSGLKGAPPG YVGYGEGGVL TEAVRRRPYS VVLLDEIEKA HRDVHEMFFQ VFDKGYMEDG DGRYIDFRNT TILLTSNVGS ELSTSLCADP SLAPNQDGLR EALTPELLKV FPAAFLGRVT VVPYRPLADS VLASIVRLYL ERIVKRMADG HGIALTYDDA VVNYIIGRCL VQETGARVLI GFIEQHVLPR LSALWLDAFA SKRTLSHIVI GVADPSCMPA QALSFDAIAF HSDEPVL
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