Gene Bamb_3444 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_3444 
Symbol 
ID4312179 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp241034 
End bp242005 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content69% 
IMG OID638151286 
ProductLysR family transcriptional regulator 
Protein accessionYP_775332 
Protein GI115358194 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.108164 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACACA CCCCCGAGCC GGTTTCCGGC AACCTGAACT GGGACGACCT GCGCTTCTTC 
CTCGAGGTCG CGCGCACGCA GCGTGCGAGC GGCGCGGCGA AGCGGCTCGG CGTCGACTAC
ACGACCGTCG CGCGGCGCAT TCGCGCGCTC GAGGCCGCGA TGGGCACGCT GCTGTTCGAC
AAGTCGCGCT CCGGCGGCTT CACGCTGACG GCCGAGGGGC AGCGACTCGT CGCGTATGCG
GACGCGATGG AGACGACCGT GCAATCCGCG TGCGACCAGG TCGCGAACAC CGGCGGCGCG
CTGTCGGGCC ACGTGCGGAT CGGGTCGACC GAAGGGTTCG GCTGCTTCTT TCTTGCGCCG
CAGCTCGCGC GGTTTCGCGT TGCGCATCCG CATGTGACGG TCGACCTGCT GCCCGTCCCG
CATTTCGTCA ATCTGCCGAA GCGCGAGGCC GATCTGGCGA TCACGCTCGA GCGGCCCGAA
CGCGGGCCTT ACGTGGTCAC GAAGCTGTGC GACTACCAGT TGCGGCTCTA CGCGACGCGC
GACTATCTGG CGAACCATGC GCCGATCACC TGCACCGACG ATCTCGCGCG GCATGCGTTC
GTCAGCTACG TCGACGATCT CGCGTTCAGC AGCGAGCTGC TGTATCTGGA GCGGGCGGTG
CCCGGCGCGA CGGCCGGGTT GCGCACGACG AGCGTGATCG CGCAGGTGTT CGCCGCGCTG
CAGGGCGGCG CGCTCGCGAT CCTGCCGTGC TTCATGGCGG CCACGCAGCC GGCGCTGGTG
CCGGTGCTGC CGGACGACGT GGTGGTCACG CGCTGTTTCT GGCTGACCTG TCGCGAGGAT
CTGCGCAAGC TGCGGCGGGT GACGGCGCTA TGGGATTACC TGCGCGCGGC GGCGGATGCG
AATCGGGCGT TGCTGATGGG GGAGTCGGGG GTGTTGCGGT TTGTCGGGGA ACGCGCGGAC
GGCACGCCGT AA
 
Protein sequence
MRHTPEPVSG NLNWDDLRFF LEVARTQRAS GAAKRLGVDY TTVARRIRAL EAAMGTLLFD 
KSRSGGFTLT AEGQRLVAYA DAMETTVQSA CDQVANTGGA LSGHVRIGST EGFGCFFLAP
QLARFRVAHP HVTVDLLPVP HFVNLPKREA DLAITLERPE RGPYVVTKLC DYQLRLYATR
DYLANHAPIT CTDDLARHAF VSYVDDLAFS SELLYLERAV PGATAGLRTT SVIAQVFAAL
QGGALAILPC FMAATQPALV PVLPDDVVVT RCFWLTCRED LRKLRRVTAL WDYLRAAADA
NRALLMGESG VLRFVGERAD GTP