Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_3444 |
Symbol | |
ID | 4312179 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | + |
Start bp | 241034 |
End bp | 242005 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638151286 |
Product | LysR family transcriptional regulator |
Protein accession | YP_775332 |
Protein GI | 115358194 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.108164 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGACACA CCCCCGAGCC GGTTTCCGGC AACCTGAACT GGGACGACCT GCGCTTCTTC CTCGAGGTCG CGCGCACGCA GCGTGCGAGC GGCGCGGCGA AGCGGCTCGG CGTCGACTAC ACGACCGTCG CGCGGCGCAT TCGCGCGCTC GAGGCCGCGA TGGGCACGCT GCTGTTCGAC AAGTCGCGCT CCGGCGGCTT CACGCTGACG GCCGAGGGGC AGCGACTCGT CGCGTATGCG GACGCGATGG AGACGACCGT GCAATCCGCG TGCGACCAGG TCGCGAACAC CGGCGGCGCG CTGTCGGGCC ACGTGCGGAT CGGGTCGACC GAAGGGTTCG GCTGCTTCTT TCTTGCGCCG CAGCTCGCGC GGTTTCGCGT TGCGCATCCG CATGTGACGG TCGACCTGCT GCCCGTCCCG CATTTCGTCA ATCTGCCGAA GCGCGAGGCC GATCTGGCGA TCACGCTCGA GCGGCCCGAA CGCGGGCCTT ACGTGGTCAC GAAGCTGTGC GACTACCAGT TGCGGCTCTA CGCGACGCGC GACTATCTGG CGAACCATGC GCCGATCACC TGCACCGACG ATCTCGCGCG GCATGCGTTC GTCAGCTACG TCGACGATCT CGCGTTCAGC AGCGAGCTGC TGTATCTGGA GCGGGCGGTG CCCGGCGCGA CGGCCGGGTT GCGCACGACG AGCGTGATCG CGCAGGTGTT CGCCGCGCTG CAGGGCGGCG CGCTCGCGAT CCTGCCGTGC TTCATGGCGG CCACGCAGCC GGCGCTGGTG CCGGTGCTGC CGGACGACGT GGTGGTCACG CGCTGTTTCT GGCTGACCTG TCGCGAGGAT CTGCGCAAGC TGCGGCGGGT GACGGCGCTA TGGGATTACC TGCGCGCGGC GGCGGATGCG AATCGGGCGT TGCTGATGGG GGAGTCGGGG GTGTTGCGGT TTGTCGGGGA ACGCGCGGAC GGCACGCCGT AA
|
Protein sequence | MRHTPEPVSG NLNWDDLRFF LEVARTQRAS GAAKRLGVDY TTVARRIRAL EAAMGTLLFD KSRSGGFTLT AEGQRLVAYA DAMETTVQSA CDQVANTGGA LSGHVRIGST EGFGCFFLAP QLARFRVAHP HVTVDLLPVP HFVNLPKREA DLAITLERPE RGPYVVTKLC DYQLRLYATR DYLANHAPIT CTDDLARHAF VSYVDDLAFS SELLYLERAV PGATAGLRTT SVIAQVFAAL QGGALAILPC FMAATQPALV PVLPDDVVVT RCFWLTCRED LRKLRRVTAL WDYLRAAADA NRALLMGESG VLRFVGERAD GTP
|
| |