| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3436 |
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| Symbol | |
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| ID | 4312171 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 231076 |
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| End bp | 232632 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 638151278 |
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| Product | major facilitator transporter |
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| Protein accession | YP_775324 |
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| Protein GI | 115358186 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00141924 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0811342 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCTGC CTTCCCCCGC CTCGCGCGCC GCCGCGCCCG CGAACCCGCG CCTGCCGGCC
GCCGCGACGC TCGCGGTCGC GTCGGCGACG TGCTCGCTGA TCGTGCTCGA CACGAACGTC
GTCGCGGTGT CGCTGCCGAG CATCGCGCGC GGCTTCCATG CGAGCTTCGC CGACATCGAA
TGGGTCGTGA GCGCCTACAT GACCGCGTTC GCCGCGTGCT TGCTGCCGGC CGGCGGGCTC
GCCGACCGTT TCGGCCGCAA GCGCATGCTC GGCGCGGGGC TCGCGCTGTT TTCGCTTGCG
TCGCTCGGTT GCGGACTCGC GCCGTCGGCC GGCTGGCTGA TCGCCGCGCG CGCGGTGAAG
GGCGGCGGGG CCGCGCTGCT GCTGACGGCC GCGCTCGCGG TCATCGCGAA CCGCTTTCCG
GACGGGCGCG AACGGGCCCG CGCGTGGGCG ATCTGGGGGA TGTGCATGGG GATCGCGACG
GCCGTCGCGC CGCTCGTTGG CGGCGCGATC ACGCATTGGA TCGGCTGGCG CTGGGTGTTC
CTGCTGAATC TGCCGGTGTG TGCGCTGCTC GCGGCCGGCG CTCGCGTCGC GATCGACGAG
TCGCGCGATC CGCACGCGAA ACGGGTGGAC GCCGCCGGCA GCCTGCTGTT CGGCGCGGCG
CTCGCGTGCG CGATCGCGGC GCTGATCGGT GCGCCGTCGC ACGGCTGGCT GTCGGGCGCG
ACGCTCGGCC GGTTTGCGTT CGCCGCCGCG CTGCTGGCCG CGTTCGTCGG CGCGGAGCGC
TGGCAGGCGC GGCCGATGAT CGATCTCGCG CTGTTTCGCC AGCCGCGCTT CGTCGGCGCG
GTGCTCGCGA TGTTCGGCTA TGCGGCGTGC GCGCAGGTGA TGATGACGTT TCTGCCGCTG
TACCTGCAGA ACGCGTTCGG GATGTCGGCG ATCGACGCGG GGCTCGGGAT GCTGCCGTTC
GCGGTCGCGA TGATCGGCGG GCCGTCGCTC GGTGGCATGC TCGCCGCGCG CGTGTCGCCC
GGCGGCGTGC TGGCGGGCGG GCTCGCACTG ATCGGCGCGG GCAATCTCGC GACCGCCGCG
CTGACGGCCG GCGGCGACTA CCGGCTCGTC GCGCTCGGCA TGTTCGTGAC GGGGTGCGGC
GCCGGCATCA TGAACGGCGA CACGCAGAAG GCGATCATGG CGTGCGTGCC GCCGAACCGC
ACCGGGATGG CGTCTGGCAT CAGCACGACG ACCCGCTTCT CGGCGATCGT GACGGCCGTC
GGCGTGCTCG GCGCGGTGCT GGCCGCCAGT ACGCACGCGC AGCTCGACCG GCTGCTGTCG
GCCGCACCGG GCGTGCGGGC ATTCGTCGAT GCGCCGTTCA TGTCGAGCCT GCTGGCCGGC
GATCTCGCGC AGGCGCTCGC GCACGTGCCG CCGTCGTCCG CGCGCACGCT CGCGGAAGCG
GCGCCCGCGG CGTTCGCGAG TGGATTCGCC GACGCGTTGA CGGTGAGCGG TGTGCTTGCG
CTTGCTGCCG CCGTCGTTGC GTACAAGTTG CTTGCGCAAC CGATGCGTGA CGCGTGA
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| Protein sequence | MSLPSPASRA AAPANPRLPA AATLAVASAT CSLIVLDTNV VAVSLPSIAR GFHASFADIE
WVVSAYMTAF AACLLPAGGL ADRFGRKRML GAGLALFSLA SLGCGLAPSA GWLIAARAVK
GGGAALLLTA ALAVIANRFP DGRERARAWA IWGMCMGIAT AVAPLVGGAI THWIGWRWVF
LLNLPVCALL AAGARVAIDE SRDPHAKRVD AAGSLLFGAA LACAIAALIG APSHGWLSGA
TLGRFAFAAA LLAAFVGAER WQARPMIDLA LFRQPRFVGA VLAMFGYAAC AQVMMTFLPL
YLQNAFGMSA IDAGLGMLPF AVAMIGGPSL GGMLAARVSP GGVLAGGLAL IGAGNLATAA
LTAGGDYRLV ALGMFVTGCG AGIMNGDTQK AIMACVPPNR TGMASGISTT TRFSAIVTAV
GVLGAVLAAS THAQLDRLLS AAPGVRAFVD APFMSSLLAG DLAQALAHVP PSSARTLAEA
APAAFASGFA DALTVSGVLA LAAAVVAYKL LAQPMRDA
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