| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3374 |
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| Symbol | |
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| ID | 4312234 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 169507 |
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| End bp | 170664 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638151215 |
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| Product | porin |
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| Protein accession | YP_775262 |
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| Protein GI | 115358124 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAAC TCGCTCTCTC GACCCTCTCG CTCGCCCTGC TGGGCGCCGC CGGCGCTGCT
CATGCTCAGT CGAGCGTGAC GCTGTACGGC GTGATCGACA CGTCGATCGC ATGGGTTCAC
GGCAACAACG GTCAAGCCAA CAACTCGTGG CAAATGCTGT CGGGCAACCT GCAAGGCAGC
CGTTGGGGCC TGAAAGGCGC TGAAGACCTC GGCGGCGGCC TGAAGGCGAT CTTCCAGTTG
GAAAACGGTT TTGATCCGGG CACGGGCCAC CTGAACCAGG GCAGTCGCAT GTTCGGTCGT
CAGGCGTTCG TCGGCCTCCA GAGCGACCAG TACGGTACGC TGACGCTCGG CCGCCAGTAC
GACCCGCTGG TCGACCTGGT CCAGGCAGTG ACGGCTGACA ACTACTTCGG CAGCGTGATG
GCAACGCCGG GCGACGTCGA CAACAACGAC AACTCGCTGC GCGTCAGCAA CGCAATCAAG
TACACGTCGC CGGTCTGGGG CGGCTTCCAG GTCGAAGGCA TGTACGCCCT CGGCGGCGTT
GCAGGCAAGA CGGGTTCGGG CCAGACGTGG TCGGTCGCGG CTGCCTACAA CAACGGCCCG
GTCGGCGTTG CAGCAGGCTA CTTCTACGCA GCCAACCCGT CGCCGACGAC GGCTGTCGGC
CGCGCAGGCT GGGGTTCGAC GACGTCCGAC GCGATCTTCG ACGGCCCGAT CAACTCGGGT
TACGCAACGG CGAAGTCGAT CGCCATCGCG CAAGTCGCAG GTCAGTACGC ACTGGGCCCG
GTGACGTTCG GCCTCGGCTA CAGCAACGCA CAGTACAAGC CGGATGCATT CTCGGGCTTC
GGTTCGACCG AAAAGTACAA CACGGGCCGC GCGTTCGTGA CGTACCAGGT CACGCCGCCG
CTGCTGCTGG GCCTCGGCTA CTCGTACACG CGAGCCAGCG GCGACACGAA GGCGAAGTAC
CACCAAGTCG GTGTCGGCGC GGACTACTCG CTGTCGAAGC GCACGGACAT CTACCTGGTT
GGCGCATACC AGCACGCGAG CGGTACGCAG CTCGTCGACG GCGTGCAGCA AAGCGCGCAA
GCGTCGATCG CTTCGTACGG TTTCGCCGGC AAGAGCTCGG CCGAACTCGT CGCGCTCGGC
ATTCGTCACA AGTTCTAA
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| Protein sequence | MKKLALSTLS LALLGAAGAA HAQSSVTLYG VIDTSIAWVH GNNGQANNSW QMLSGNLQGS
RWGLKGAEDL GGGLKAIFQL ENGFDPGTGH LNQGSRMFGR QAFVGLQSDQ YGTLTLGRQY
DPLVDLVQAV TADNYFGSVM ATPGDVDNND NSLRVSNAIK YTSPVWGGFQ VEGMYALGGV
AGKTGSGQTW SVAAAYNNGP VGVAAGYFYA ANPSPTTAVG RAGWGSTTSD AIFDGPINSG
YATAKSIAIA QVAGQYALGP VTFGLGYSNA QYKPDAFSGF GSTEKYNTGR AFVTYQVTPP
LLLGLGYSYT RASGDTKAKY HQVGVGADYS LSKRTDIYLV GAYQHASGTQ LVDGVQQSAQ
ASIASYGFAG KSSAELVALG IRHKF
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