Gene Bamb_3256 details

Gene Information

• Locus tag: Bamb_3256
• Symbol: dnaG
• ID: 4312222
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia ambifaria AMMD
• Kingdom: Bacteria
• Replicon accession: NC_008391
• Strand: +
• Start bp: 37642
• End bp: 39510
• Gene Length: 1869 bp
• Protein Length: 622 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 638151097
• Product: DNA primase
• Protein accession: YP_775145
• Protein GI: 115358007
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0358] DNA primase (bacterial type)
• TIGRFAM ID: [TIGR01391] DNA primase, catalytic core

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 6
• Fosmid unclonability p-value: 0.0530643
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGATTCCGC ATTCGTTCCT GCAGGATTTA CTGAACCGCG TCGATATCGT CGACGTGGTG 
GGCCGGTACG TGCAGCTCAA GAAGGGCGGC GCCAACTTCA TGGGGCTGTG CCCGTTCCAT 
AACGAGAAGA GCCCGTCGTT TACCGTGAGC CCGACCAAGC AGTTCTATCA CTGCTTCGGC 
TGCGGCGCGC ACGGCACGGC GATCGGCTTC CTGATGGAGC ACGCGGGGCT CACGTTCCCG 
GAAGCCGTGC AGGAACTCGC GCAATCGGTC GGGCTGACCG TGCCGCACGA GCCGTCGATG 
CGCGGCGGCG GTGGGGGCGG CGGCGACTAT CCGGCACCCG TGTCCAAATC GGTCGCGACG 
GCGCTGTCCG ACGTGATGTC CGTCGCGTGC GACTACTATC GCAAGCAGTT GCGCGGCGCG 
ACCGTCGCGA TCCAGTACCT GAAGAACCGG GGCCTGACCG GCGAGATCGC CGCGCGCTTC 
GGCCTCGGCT ATGCGCCGGA CGGCTGGCAG AACCTCGAAA CCGCGTTCCC CGACTATCGC 
GACGAATCGC TCGTCGAATC GGGGCTCGTG ATCGTCAGCG AAAAAACCGA CGCGCAAGGC 
GTCGCCCGCC GTTACGACCG GTTCCGCGAG CGGATCATGT TCCCGATCCG CAACGTGAAG 
GGGCAGGTGA TCGGGTTCGG CGGCCGCGTG CTCGGCAGCG GCGAGCCGAA GTACCTGAAT 
TCGCCCGAAA CGCCGCTGTT CAACAAGGGC AGCGAACTGT ACGGGCTGTT CGAGGCGCGC 
CTCGCGATCC GCGAGCGCAA GTACGTGCTG GTCGTCGAGG GCTACATGGA CGTCGTCGCG 
CTCGCGCAGC TCGGCTTCCC GAACGCGGTC GCGACGCTCG GCACGGCGTG CACGCCGATC 
CACGTGCAGA AGCTGCTGCG CCAGACCGAT ACGGTCATTT TCAGCTTCGA CGGCGACTCG 
GCCGGCCGGC GTGCGGCGCG CCGCGCGCTC GAGGCGTGCC TGCCGCATGC GGCGGACAAC 
CGGACGATCC GATTCCTTTT CCTGCCGTCC GAACATGATC CGGACAGCTA CGTACGCGAA 
TTCGGCGCGG AAGCGTTCTC CGAGCAGGTC GAACGCGCGA TGCCGCTGTC GCAATTTCTG 
TTGAACGAAG CAATTGCCGG CAAGGCGCTC GATCAACCGG AAGGTCGCGC GAAGGCGCTG 
TTCGACGCGA AGCCGCTGCT GCAGGCGCTG CCTGCTAATG CGTTGCGTGC GCAAATCATG 
CACATGTTCG CCGACCGTCT CGATATTCCG TTCGAGGAAG TCGCGGCGCT GTCGGATGTC 
GATGCACGCA TTGCCGCGCC GGCGCGCCAC GCGCCCCCGC GCAGCGAGCG GCGACGCGTG 
ACGGACAGCG AAAAGCGGGC GTTGCGTACG CTCGTGATGC ATCCGCGGAT CGCGTCGCAG 
CTCGACGACG AGCAACTTGC GACCCTGCGC GCGCTGCCGC GCATCGGCGA GCTGTTCGCC 
GAAGTCGTCG AGCATGCGCG TGCACTCGGC GACGGCGCGG AGTTCCGGCT GCTGTCGGAC 
GTGCTGCGCA CCTCCTCGAA CGGGGCGACT TACGAGGAAA TCTTCCGCGA AATTCTGGAC 
TATGATGAAA ACGTCCGCGA CTTGCTGTTA CAGAATCCGG AAGACGAGAC GGTGCCCGAG 
CGGCAGCGCG AACAGGAGCG GATCGCGGGC GAGGAACTGC AGGCCGCGGT GCTCAAGATG 
CGTTACGACG CATGCTGCGA CCGGCTCGAT CGGCTGGCGC GGCAATCCAC CTTCACACCC 
GAGGAACTGG CCGAATTGAC GGAATTGAAC CAGCAGCGAA CCGACATGAA GCGTCGGCTC 
GGGCTGTAG 

 

Protein sequence

MIPHSFLQDL LNRVDIVDVV GRYVQLKKGG ANFMGLCPFH NEKSPSFTVS PTKQFYHCFG 
CGAHGTAIGF LMEHAGLTFP EAVQELAQSV GLTVPHEPSM RGGGGGGGDY PAPVSKSVAT 
ALSDVMSVAC DYYRKQLRGA TVAIQYLKNR GLTGEIAARF GLGYAPDGWQ NLETAFPDYR 
DESLVESGLV IVSEKTDAQG VARRYDRFRE RIMFPIRNVK GQVIGFGGRV LGSGEPKYLN 
SPETPLFNKG SELYGLFEAR LAIRERKYVL VVEGYMDVVA LAQLGFPNAV ATLGTACTPI 
HVQKLLRQTD TVIFSFDGDS AGRRAARRAL EACLPHAADN RTIRFLFLPS EHDPDSYVRE 
FGAEAFSEQV ERAMPLSQFL LNEAIAGKAL DQPEGRAKAL FDAKPLLQAL PANALRAQIM 
HMFADRLDIP FEEVAALSDV DARIAAPARH APPRSERRRV TDSEKRALRT LVMHPRIASQ 
LDDEQLATLR ALPRIGELFA EVVEHARALG DGAEFRLLSD VLRTSSNGAT YEEIFREILD 
YDENVRDLLL QNPEDETVPE RQREQERIAG EELQAAVLKM RYDACCDRLD RLARQSTFTP 
EELAELTELN QQRTDMKRRL GL