| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3196 |
|---|
| Symbol | |
|---|
| ID | 4310472 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | + |
|---|
| Start bp | 3533072 |
|---|
| End bp | 3534460 |
|---|
| Gene Length | 1389 bp |
|---|
| Protein Length | 462 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 638151038 |
|---|
| Product | FAD dependent oxidoreductase |
|---|
| Protein accession | YP_775086 |
|---|
| Protein GI | 115353247 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
|---|
| TIGRFAM ID | [TIGR03329] putative aminophosphonate oxidoreductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGACCCT TCTGGATCGA ACAAGCACTG TTCAACGACG GCGATCTCGC CCCCGCGCTG
CAGGGCGCGA CGCAGGCCGA CGTCTGTATC GTCGGCGGCG GCTTCACCGG GCTCTGGACC
GCGATCCAGG CGAAGCAGCA GAACCCGGCG CTCGACATCG TGATACTCGA GGCCGACCTG
TGCGGCGCCG GCGCGAGCGG ACGCAATGGC GGGTGCCTGC TCACGTGGTC CGCGAAATTC
CTGACGCTGC GCCGGCTGTT CGGCGAAGCG GAAGCGATCC GGCTCGTGAA GGCGTCGGAG
GCGGCCGTCC AGCACATCGC CGACTTCTGC CGCGCGCATC GCATCGATGC CGAACTGCGG
CTCGACGGCA CGCTGTACAC GGCGACGTCG CGCGCGCAGA TCGGCACGCT CGCGCCTGTG
CTCGACGCGC TCGCCGCGTG CGGCATCCAC AGCTACGAAC CGCTGCCGGC CGCCGACGTC
GCGCGCCGCT CGGGTTCCGT CCGCAATCTC GACGGCGTGT ACTCACTGAT CGCCGCGACC
GTGCATCCGG GCAAGCTCGC GCGCGGGCTG CGGCGCGTCG CGCTCGATAT GGGGATCCGG
ATCCACGAGC GCACGCCGCT CGTCGACTTC ACGCCGGGGC AGCCGGCCGT CGTGCGCACG
CCGTCCGGCA GCGTGCGCGC GGGCAAGCTG GTGTTCGCGA TCAACGCGTG GATGGCGAGC
CGCTTCCCGC AGTTCGAACG CACGATCGCC GTCGTGTCGA GCGACATGGT CATCACCGAA
AAATGCCCGG AATTGCTCGA GCAGACCGGG CTCGTGGACG GCGTATCGGT GCTCGATTCG
CGGATCTTCG TGTACTACTA CCGCACGACG GCCGATGGTC GGCTGATGCT CGGCAAGGGC
GGCAATACGT TCTCCTGGCG CAGCCGCATC GCGCCGGTGT TCGACCGGCG CTCGCCGTAC
GAGGCGCAGC TCACGCGGAG CCTGCGCGAA TTCTTCCCGT CGCTCGCGGG CGTGCCGATC
ACCGCGAGCT GGAACGGTCC GTCGGACCGC TCGGTGACGG GCTTCCCGTT CTTCGGCCGC
CTCGACGACG CGCCGAACGT GTTCTACGGC TTCGGCTATT CGGGCAACGG CGTCGGGCCG
ACCTACATGG GCGGGCAGAT CCTGTCGTCG CTGGTGCTCG GCCTCGACAA CGCATGGACG
CGCAGCCCGA TCGTGCGCGG CCCGCTCGGC CATTTCCCGC CGGAGCCGAT CCGCTATGTC
GGCGCGCACG TCGTGCGCAA CGCGATCCGC CGCAAGGAGC GCGCGGAAGA CGAGAGCCGG
CGGCCGGCGG CCGTCGACAC GTGGCTCGCG AAATTCGCGA GCGCGGCGGG GAAGGCGGAC
AAGGGGTGA
|
|---|
| Protein sequence | MRPFWIEQAL FNDGDLAPAL QGATQADVCI VGGGFTGLWT AIQAKQQNPA LDIVILEADL
CGAGASGRNG GCLLTWSAKF LTLRRLFGEA EAIRLVKASE AAVQHIADFC RAHRIDAELR
LDGTLYTATS RAQIGTLAPV LDALAACGIH SYEPLPAADV ARRSGSVRNL DGVYSLIAAT
VHPGKLARGL RRVALDMGIR IHERTPLVDF TPGQPAVVRT PSGSVRAGKL VFAINAWMAS
RFPQFERTIA VVSSDMVITE KCPELLEQTG LVDGVSVLDS RIFVYYYRTT ADGRLMLGKG
GNTFSWRSRI APVFDRRSPY EAQLTRSLRE FFPSLAGVPI TASWNGPSDR SVTGFPFFGR
LDDAPNVFYG FGYSGNGVGP TYMGGQILSS LVLGLDNAWT RSPIVRGPLG HFPPEPIRYV
GAHVVRNAIR RKERAEDESR RPAAVDTWLA KFASAAGKAD KG
|
|---|
| |