| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3194 |
|---|
| Symbol | |
|---|
| ID | 4310470 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | - |
|---|
| Start bp | 3531236 |
|---|
| End bp | 3532474 |
|---|
| Gene Length | 1239 bp |
|---|
| Protein Length | 412 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 638151036 |
|---|
| Product | phosphonoacetate hydrolase |
|---|
| Protein accession | YP_775084 |
|---|
| Protein GI | 115353245 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1524] Uncharacterized proteins of the AP superfamily |
|---|
| TIGRFAM ID | [TIGR02335] phosphonoacetate hydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTGAAA CGCCTGTATC CGTGGAAGTG AACGGCCGCC GCTACAACTG GATGAGCCGC
CCGGTGGTGG TGGTCTGCGT CGACGGCTGC GCCTATGAAT ATCTCGAGAT GGCGGCCGAG
GCCGGCGTCG CGCCGTTCCT GCGCACGCTG CTGAAGCCGG GCACGGCGCT CAAGGGCGAG
TGCGTGGTGC CGAGCTTCAC GAACCCGAAC AACCTGTCGA TTGTTACCGG CGTGCCGCCG
GCGATCCACG GGATAAGCGG CAACTACTTC TACGATCGCG ACACCGGCGC CGAGGTGCTG
ATGAACGATC CGAAGTACCT CGTCGCGCCC ACCGTGCTCG CCACCTTCGC CGAGCGGGGC
GCGCGCGTCG CGGTCGTCAC CGCGAAGGAC AAGCTGCGCC GCCTGCTCGG CAAGGGGCTC
AAGGGCATCT GCTTCTCGTC GGAGAAGGCC GACGAGGCGA GCCTCTCGGA AAACGGCATC
GACAACGTGC TCGAGTTGGT CGGCAAGCCG GTGCCGAGCG TGTACAGCGC CGACCTGTCC
GAATTCGTGT TCGCGGCCGG CGTGCGCCTG CTCGAGACGC GGCCGATCGA CCTGATGTAC
CTGTCGACGA CCGACTACGT GCAGCACAAG TGCGCGCCCG GCACCGACGG CGCGAACGCG
TTCTACCAGA TGATGGACAC GTATCTGAAG CGGCTCGACG AGCTCGGCGC GATCGTCGCG
ATCACGGCCG ATCACGGGAT GAACGCGAAG CACGACGGCG AGACCGGCGA GCCGAACGTG
ATCTACCTGC AGGAGCTGTT CGACGAATGG CTCGGGCACG ACGTGGCGCG CGTGATCCTG
CCGATCACCG ACCCGTACGT CGTGCATCAC GGTGCGCTCG GCTCGTTCGC GACCGTCTAC
GTGCCGGCTT CCGCCGACGT CGACGCGCTG CGCGCGCGGC TCGCCGCGGT GGACGGCATC
GAGGTCGTGC TGACGGGCGC CGAAGGCTGC GCGCGCTTCG AGTTGCCGCC CGACCGGATG
GGCGACCTGA TCGTGATCTC TAAGCAGGAC GTCGTGCTCG GCACGCGTCG CATCAAGCAC
GACCTGTCGG GGCTCGACGT GCCGCTGCGC TCGCACGGCG GGATCTCCGA GCAGATCGTG
CCGCTGATCT TCAGCAAGCC GGTCGCGACT GACGTCACGA GCCGCGCGCG GCTGCGCAAC
TTCGACATCA TCGACATCGC GCTCAACCAT CTGCAGTGA
|
|---|
| Protein sequence | MTETPVSVEV NGRRYNWMSR PVVVVCVDGC AYEYLEMAAE AGVAPFLRTL LKPGTALKGE
CVVPSFTNPN NLSIVTGVPP AIHGISGNYF YDRDTGAEVL MNDPKYLVAP TVLATFAERG
ARVAVVTAKD KLRRLLGKGL KGICFSSEKA DEASLSENGI DNVLELVGKP VPSVYSADLS
EFVFAAGVRL LETRPIDLMY LSTTDYVQHK CAPGTDGANA FYQMMDTYLK RLDELGAIVA
ITADHGMNAK HDGETGEPNV IYLQELFDEW LGHDVARVIL PITDPYVVHH GALGSFATVY
VPASADVDAL RARLAAVDGI EVVLTGAEGC ARFELPPDRM GDLIVISKQD VVLGTRRIKH
DLSGLDVPLR SHGGISEQIV PLIFSKPVAT DVTSRARLRN FDIIDIALNH LQ
|
|---|
| |