Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_3185 |
Symbol | |
ID | 4310461 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | + |
Start bp | 3520118 |
End bp | 3522715 |
Gene Length | 2598 bp |
Protein Length | 865 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 638151026 |
Product | DNA topoisomerase III |
Protein accession | YP_775075 |
Protein GI | 115353236 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0550] Topoisomerase IA |
TIGRFAM ID | [TIGR01056] DNA topoisomerase III, bacteria and conjugative plasmid [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCAAAG CTCTGATCAT TGCGGAAAAG CCTTCTGTCG CGAACGACAT CGCGCGCGCT TTGGGCGGCT TTACCAAGCA TGACGAATAC TTCGAAAGCG ACGAATTCGT CCTTTCGTCC GCGGTCGGCC ACCTGCTGGA AATCGCCGCC CCGGAAGAGT ACGAGGTCAA GCGCGGCAAA TGGAGCTTCG CTCATCTGCC CGTCATCCCC CCGCATTTCG ACCTCAACCC GATTGCAAAA AGCGAATCGC GCCTGAAGGT CCTTACCAAG CTGATGAAGC GCAAGGACGT CGACCGCCTG ATCAACGCAT GTGACGCGGG GCGCGAGGGC GAACTGATTT TCCGCCTGAT CGTGCAGCAT GCGAAGGCGA AGCAGCCGGT CCAGCGCCTG TGGCTGCAGT CGATGACGCC GCAGGCGATT CGCGACGGTT TCGCGCACCT GCGCAGCGAC ACCGACATGC AACCGCTCGC CGACGCCGCA CGCTGCCGCT CCGAAGCCGA CTGGCTCGTC GGGATCAACG GCACCCGCGC GATGACCGCG TTCAACAGCA AGGGCGGCGG CTTCTTCCTG ACGACCGTCG GCCGCGTTCA GACGCCAACG CTGTCGATCG TCGTCGAACG TGAAGAGAAA ATCCGCCGCT TCGTCCCGCG GGACTACTGG GAAGTGAAGG CCGCGTTCGC CTGCGCGAAC GGCTTCTACG AAGGCAAGTG GTACGACCCG AAATTCAAGC GGGACGAGTT CGATCCTGAA AGGCGCGACT CCCGCCTGTG GAGCCTGCCG GCCGCCGAAA CCATCGTCGC CGCATGCCGC GACCAGGTCG GCACGGTATC CGAGGAATCG AAGCCGTCGA CCCAGCTGTC GCCGCTGCTG TTCGATCTGA CGAGCCTGCA GCGCGAGGCG AACAGCCGCT TCGGCTTCTC CGCGAAGAAT ACGCTCGGCC TCGCGCAGGC GCTGTATGAA AAGCACAAGG TGCTGACGTA CCCGCGTACC GACGCGCGCG CGCTGCCGGA AGACTACATT TCGACGGTGC AGTCGACGCT CGAAATGCTC AAGGAGAGCC ACAACTACCT GCCGCATGCG AAGCGGGTGC TGGACCAGGG CTGGGTGAAG CCGAACAAGC GGATCTTCGA CAATTCGAAG ATCAGCGACC ACTTCGCCAT CATCCCGACG CTGCAGGCGC CGAAGTCGCT GTCCGAGCCG GAGCAGAAGC TGTACGACAT GGTCGTGAAG CGCTTCCTCG CGGTGTTCTT CCCGGCGGCC GAATTCCGTG TCACGACGCG GATCACCGAA GTCGCCGGTC ATCACTTCAA GACCGAAGGC AAGGTGCTCG TCGAGCCGGG CTGGCTGCAG GTGTACGGCC GCGACGCCGA AGGCGCGGAC GCGAACCTCG TGCCGGTGCA GAAGGACGAG AAGGTGAAGA CGGACGAGAT CGCCGCCGTG GCGCTCGTGA CCAAGCCGCC CGCACGCTAC TCCGAAGCGA CGCTGTTGTC GGCAATGGAA GGCGCGGGCA AGCTCGTCGA GGACGACGAG CTGCGCGAGG CGATGGCCGC GAAGGGCCTC GGCACGCCGG CAACGCGCGC GGCGATCATC GAAGGCCTAC TGGGCGAAAA ATATCTCGTC CGTGAAGGCC GCGAGCTGAT CCCGACCGCG AAGGCATTCC AGCTGATGAC GCTGCTGCGC GGGCTCGGCG TGAAGGAGCT GACCGCGCCC GAGCTCACCG GCGAATGGGA ATACAAGCTG TCGCAGATGG AGCGCGGCAA CCTCGGCCGC GATGCGTTCA TGCAGGAAAT CGCCCGCATG ACGCAGCAGA TCGTCAAGCG CGCGAAGGAA TACGATTCCG ACACGATCCC CGGCGATTAC GCGACGCTCC AGACGCCGTG CCCGAACTGC GGCGGCCAGG TGAAGGAAAA CTACCGCCGC TTCGCGTGCA CGAAGTGCGA GTTCTCGATC TCGAAGATTC CGGGCAGCCG GCAGTTCGAG ATCGCGGAAG TCGAGGAACT GCTGCAGCAG AAGACCATCG GTCCGCTGTC CGGTTTCCGC AGCAAGATGG GCCGTCCGTT CTCGGCGATC CTGAAGCTCT CGTTCGACGA CGAAACGAAG AACTACAAGC TCGAGTTCGA CTTCGGCCAG GACCAGGGCG GCGAGGAAGG CGAGGCGCCC GACTTCTCCG AGCAGGAACC GGTCGGCGCG TGCCCGAAAT GCAACGGCCG CGTGTTCGAG CACGGGATGA GCTATGTGTG CGAGCACTCG GTCGCGAATC CGAAGACCTG CGACTTCCGT TCGGGCAAGG TGATCCTGCA GCAGGAAATC ACGCGCGACC AGATGGCCAA GCTGCTCGCC GACGGTCGCA CGGATCTGAT GCCGAACTTC AAGTCGTCGC GCACGGGCCG CAACTTCAAG GCGTTCCTCG TGAAGCAGCC GGACGGCAAG ATCGGTTTCG AGTTCGAAAA GAAGGAGCCG AAGGCTGCCG CCGCGAAGAA GACGGCAAAA TCGGCGACGA AGGATGCCGA AACCGTGACG GAAGGCGCCG ACGAGAAACC GGCACCGGCC CGCAAGACCG CCGCCCGCAA GACGACGGCG CGCAAGACGG GCTCGTAA
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Protein sequence | MSKALIIAEK PSVANDIARA LGGFTKHDEY FESDEFVLSS AVGHLLEIAA PEEYEVKRGK WSFAHLPVIP PHFDLNPIAK SESRLKVLTK LMKRKDVDRL INACDAGREG ELIFRLIVQH AKAKQPVQRL WLQSMTPQAI RDGFAHLRSD TDMQPLADAA RCRSEADWLV GINGTRAMTA FNSKGGGFFL TTVGRVQTPT LSIVVEREEK IRRFVPRDYW EVKAAFACAN GFYEGKWYDP KFKRDEFDPE RRDSRLWSLP AAETIVAACR DQVGTVSEES KPSTQLSPLL FDLTSLQREA NSRFGFSAKN TLGLAQALYE KHKVLTYPRT DARALPEDYI STVQSTLEML KESHNYLPHA KRVLDQGWVK PNKRIFDNSK ISDHFAIIPT LQAPKSLSEP EQKLYDMVVK RFLAVFFPAA EFRVTTRITE VAGHHFKTEG KVLVEPGWLQ VYGRDAEGAD ANLVPVQKDE KVKTDEIAAV ALVTKPPARY SEATLLSAME GAGKLVEDDE LREAMAAKGL GTPATRAAII EGLLGEKYLV REGRELIPTA KAFQLMTLLR GLGVKELTAP ELTGEWEYKL SQMERGNLGR DAFMQEIARM TQQIVKRAKE YDSDTIPGDY ATLQTPCPNC GGQVKENYRR FACTKCEFSI SKIPGSRQFE IAEVEELLQQ KTIGPLSGFR SKMGRPFSAI LKLSFDDETK NYKLEFDFGQ DQGGEEGEAP DFSEQEPVGA CPKCNGRVFE HGMSYVCEHS VANPKTCDFR SGKVILQQEI TRDQMAKLLA DGRTDLMPNF KSSRTGRNFK AFLVKQPDGK IGFEFEKKEP KAAAAKKTAK SATKDAETVT EGADEKPAPA RKTAARKTTA RKTGS
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