| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3170 |
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| Symbol | |
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| ID | 4310652 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 3505285 |
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| End bp | 3506067 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 638151010 |
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| Product | Sel1 domain-containing protein |
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| Protein accession | YP_775060 |
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| Protein GI | 115353221 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0384839 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGACG ACGACGACGA CGGCGCCGGG ACGGGACGCG CGCGGCGCGC GACCGGTGTA
CGTGGGCGGA TCGGTGCGAT GCTCGGGCTG TGGGTCGTGT GCATCGCGGC GTCGGCGCAG
AATGCGCCGC ACGCGAAACC GGATCCGGCA CACGAGACGC AAGCGGCGGT GGCCGCCTAC
AACGCCGGCG ACTATCGCGC GGCGCTGGTG CAGTTCCACG ACGCAGCCGA ACGCGGCGAC
CGGCTCGCGC AGTTCAATTA CGCGATGATG CTGCTCACCG GCGTCGGCGT GACCGCGAAA
GTCGACGAAG GGCTGCGCTG GCTGAAGCGG GCGGCCGACG CGAACATGTC GCACGCGCAG
TACGTGTACG GACGGATGTT CGACGACGGC GAATTCGTCG CGCGCAATCC GGCCGAAGCG
CACCGCTGGT TCCTGCGTGC GGCGAAGCAG GGGCACGTGC AGGCCGCGCT GTCGCTCGCG
AACCAGTTCC TCGACGGGCG CGGTACGCCG CGCGACAACC GGCAGGCGTT CGCGTGGTAC
AAGCAGGCGG CCGACGCGGG CGAGCCGACC GCGCAGTACG TGACCGCGTC GTTCTACGAG
CGCGGCGGCG ACGGCGTCAC GCAGAACCTG AACATCGCGC GCGCGTACTA TGCGGCCGCG
GCCGCGCAGG GCGACGAGAC GGCCGAGCTG AAATTCAAGG AGCTGAGCGC GCGACTGAAG
ACGCAGGAGC CGGCATCGGG CGCCGGTGCA GACCACGCAA GCCCACGCGC GACGCCGCAA
TGA
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| Protein sequence | MNDDDDDGAG TGRARRATGV RGRIGAMLGL WVVCIAASAQ NAPHAKPDPA HETQAAVAAY
NAGDYRAALV QFHDAAERGD RLAQFNYAMM LLTGVGVTAK VDEGLRWLKR AADANMSHAQ
YVYGRMFDDG EFVARNPAEA HRWFLRAAKQ GHVQAALSLA NQFLDGRGTP RDNRQAFAWY
KQAADAGEPT AQYVTASFYE RGGDGVTQNL NIARAYYAAA AAQGDETAEL KFKELSARLK
TQEPASGAGA DHASPRATPQ
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