Gene Bamb_3167 details

Gene Information

• Locus tag: Bamb_3167
• ID: 4310649
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia ambifaria AMMD
• Kingdom: Bacteria
• Replicon accession: NC_008390
• Strand: +
• Start bp: 3501124
• End bp: 3501636
• Gene Length: 513 bp
• Protein Length: 170 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 638151007
• Product: rod shape-determining protein MreD
• Protein accession: YP_775057
• Protein GI: 115353218
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG2891] Cell shape-determining protein
• TIGRFAM ID: [TIGR03426] rod shape-determining protein MreD

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.00609809
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACCGTC CGCAATACAT CCTGCAGCCG GTCAACCCGT ACTTCATCGT CTTCAGCCTC 
GCCGCCGCGT TCCTGCTGAA CCTGATGCCG TGGGGCCGCC TGCCCGGCGT GCCCGATTTC 
GTCGCGCTCG TGCTGCTGTT CTGGAACATC CACCAGCCGC GCAAGGTCGG GATGGGCGTC 
GCGTTCGTGC TCGGCATCCT GATGGACGTG CACGACGCGG GGCTGCTCGG CGAGCACGCG 
CTCGCCTATA CGCTGCTGTC GTACGGGGCG ATCACGATCC ACCGCCGCGT GCTGTGGATG 
CCGATCGGCG TGCAGGTGCT GTATGTCACG CCGCTGCTCG TCGCCGCGCA GCTGGTGCCG 
TTCGTGATCC GCCTGATGAT GGGCGCCGCG TTTCCCGGCT GGCGCTATCT GGTGGACGGC 
TTCGTCGAGG CCGCGCTGTG GCCGATCGCG AGCCACCTGC TGCTGATGCC GCAACGCCGC 
CCGGTTGACC CGGACGATAC GCGCCCCATC TGA 

 

Protein sequence

MNRPQYILQP VNPYFIVFSL AAAFLLNLMP WGRLPGVPDF VALVLLFWNI HQPRKVGMGV 
AFVLGILMDV HDAGLLGEHA LAYTLLSYGA ITIHRRVLWM PIGVQVLYVT PLLVAAQLVP 
FVIRLMMGAA FPGWRYLVDG FVEAALWPIA SHLLLMPQRR PVDPDDTRPI