Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_3133 |
Symbol | xerC |
ID | 4310615 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | + |
Start bp | 3451309 |
End bp | 3452229 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638150973 |
Product | site-specific tyrosine recombinase XerC |
Protein accession | YP_775023 |
Protein GI | 115353184 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4973] Site-specific recombinase XerC |
TIGRFAM ID | [TIGR02224] tyrosine recombinase XerC |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.40751 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGACG ATCCGATCGC CGCCTACCTG TCGAACCTGA AGCACGTCAG GCAGCTGTCG GAACACACGC TGCGTGCGTA CTCGCACGAA CTCGACGAAC TGAAGAAACT CGCCGCCGGT CGCCCGCTCG ACACGCTGAC GGCCGTCGAC ATGCGCGGCG CGGTCGCGCG CGCGCATGCG GGCGGATTGT CGGCGCGCTC GATCTCGCAC CGGCTGTCCG CCTGGCGCGC GTTCTACCGC TGGCTCGCGC AGCACATCGA GATGCCCGCG AACCCGGTCG CCGCGGTGCG TGCGCCGAAG CGCCCGAAAA CCCTGCCGAA AGCACTGTCG GTCGACGACG CCTCGGCGCT GATGGACGCG CCGCTCGCCG GCACGACCGA AGGCATCCGC GATCACGCGA TCCTCGAGCT GTTCTATTCA TCGGGGCTGC GCCTCGCCGA ACTGGTCGGG CTCGACGTCA GGTACACGCA GGCCGACGGC TACCGCTCGG CCGGCTGGCT CGATCTCGCC GAAGCCGAAG TCACCGTGCG CGGCAAGGGC AACAAGGAAC GCAAGGTGCC GGTCGGCCGC AAGGCGATCG ATGCGCTGAA CGCGTGGCTC GCGGTGCGCG GCGAATTCGT GAAGCACGAC CCGCATCCGC TGTTCGTGTC CGTGCGCGGC AACCGGATGG CGCCGGGCGT CGTGCGCGAG CGCGTGAAGC GCGCGGCGCT CGCCGCGGGC ATCCCCGCCA ACGTCCACCC GCACGTGCTG CGTCATTCGT TCGCGACGCA CGTGCTGCAG TCGAGCGGCG ACCTGCGCGC GGTGCAGGAA CTGCTGGGCC ACGCGAGCAT CTCCGCGACG CAGGTCTACA CGTCGCTCGA CTTCCAGCAC CTCGCGAAGA TTTACGACAG CGCGCATCCG CGCGCGAAGA AGCGCGACTG A
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Protein sequence | MTDDPIAAYL SNLKHVRQLS EHTLRAYSHE LDELKKLAAG RPLDTLTAVD MRGAVARAHA GGLSARSISH RLSAWRAFYR WLAQHIEMPA NPVAAVRAPK RPKTLPKALS VDDASALMDA PLAGTTEGIR DHAILELFYS SGLRLAELVG LDVRYTQADG YRSAGWLDLA EAEVTVRGKG NKERKVPVGR KAIDALNAWL AVRGEFVKHD PHPLFVSVRG NRMAPGVVRE RVKRAALAAG IPANVHPHVL RHSFATHVLQ SSGDLRAVQE LLGHASISAT QVYTSLDFQH LAKIYDSAHP RAKKRD
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