| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3131 |
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| Symbol | dapF |
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| ID | 4310613 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 3449663 |
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| End bp | 3450532 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638150971 |
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| Product | diaminopimelate epimerase |
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| Protein accession | YP_775021 |
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| Protein GI | 115353182 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0253] Diaminopimelate epimerase |
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| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAACTCT CGTTCACCAA GATGCACGGC GCGGGCAACG ACTTCGTCGT GCTCGACGGC
TATTCGCGTG CGTTGCCGCC GCTCACCGAA GCGCAGGTGC GCGCGCTCGC CAACCGGCAC
TTCGGCATCG GCGCCGACCA GTTGCTGCTC GTCGAAAAGC CGACCGTCGA CGGCGCGGAT
TTCAAGTACC GGATCTTCAA TTGCGACGGC GGCGAGGTCG AACACTGCGG CAACGGCGCA
CGCTGCTTCG TGAAGTTCGT CAGCGACCGC GGCCTGACCG ACAAGCGCAG CGTGCGCGTG
CAGGTCATGA AGGGCCTGAT CACGCTGACG CTGCAGGACA ACGGCGAAGT CGTCGTCGAC
ATGGGCGCGC CCGTATTCGC GCCGGCGCAG GTGCCGTTCG ATGTATCGGG CCTCGACGGC
CGCGCCGAAG GCCGCGACAC GCTGTGGCCG CTGGACGTCG GCGGCGCGAC GCGCTGGATT
TCGGCGGTGT CGATGGGCAA TCCGCATGCG GTGCAGGTCG TCGACGACGT CGAGGCGTAT
CCGGTGCTGG AAGAAGGCCC GCTGATCGAG CGCCATGCGC GCTTCCCGCA GCGCGTGAAC
GCCGGCTTCA TGCAGATCGT GTCGCGCCAC GAAGTGAAGC TGCGCGTGTA CGAACGCGGC
GCGGGCGAGA CGCTCGCGTG CGGCACGGGC GCGTGCGCGG CGGTCGCGGC CGGCATCCGG
CGCGGCCTGC TCGATTCGCC GGTGACCGTC CATACGCACG GCGGCACGCT GACGATCGGC
TGGGACGGCG CGCGCGACGA AGCTGCCGCA CTGATGATGG CCGGGCCCGC CGCGACCGTG
TTCGAAGGCG AGATCGACCT CACCGCCTGA
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| Protein sequence | MKLSFTKMHG AGNDFVVLDG YSRALPPLTE AQVRALANRH FGIGADQLLL VEKPTVDGAD
FKYRIFNCDG GEVEHCGNGA RCFVKFVSDR GLTDKRSVRV QVMKGLITLT LQDNGEVVVD
MGAPVFAPAQ VPFDVSGLDG RAEGRDTLWP LDVGGATRWI SAVSMGNPHA VQVVDDVEAY
PVLEEGPLIE RHARFPQRVN AGFMQIVSRH EVKLRVYERG AGETLACGTG ACAAVAAGIR
RGLLDSPVTV HTHGGTLTIG WDGARDEAAA LMMAGPAATV FEGEIDLTA
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