| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_2996 |
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| Symbol | |
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| ID | 4310583 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 3313239 |
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| End bp | 3315440 |
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| Gene Length | 2202 bp |
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| Protein Length | 733 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638150836 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_774886 |
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| Protein GI | 115353047 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.18602 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCGTT GCATTCAGTC GCGCGCGACG CCGCCGCGCC GCGCGAGCGC GTCCGTCGCA
TTCGCGATGA TGACCTGTGC GGCCGCGCCG GCCTGCGCGG ACGAGGGCGA GCCGCGGCAC
GCGCCGCACC TGAACCCGAT CTTCGTTCAC GGCGAGCGCG ACGCGGGTTC GCGCGTCGAC
CGCTCGGGCT CCGCCAAATA TGCGACGCCG CTGCTCGACG TGCCGCAGAC GATCACCGTC
GTGCCGCGCG TGGTGCTCGA CGAACAGCAG GCGCTGAGCC TGCGCGAGGC GCTGTCGAAC
GTCGCGGGCA TCACGTTCAA CGCGGGAGAG GGCGGCGGCG GTTCGGGCGA CATGTTCAAT
ATCCGCGGCT TCAGCGCGAA TGCGAACATG CAGATCGACG GGCTGCGCGA CAGTGCGCAG
AACAATCGCA GCGACCTGTT CAACATCGAG GCGGTCGAAG TGATCAAGGG GCCGAACTCG
GTATTCGGCG GCGCGGGCAC GACGGGCGGC TCGGTGAACC TCGTCAGCAA GACGCCGAAG
GCCGGTGCGT CCACGGAGGC CGGCACGATG CTCGGCACGT CCGGCTATCG CCGCGTGACG
CTCGATGCGA ACCGGCCGCT GCCCGGCACC GACGATCGGG CGGCGTTCCG CCTGAACGCG
ATGGCGCACG TCAACGAAGT GCCGGGCCGC GACGACATCC GCAAGCGGCG CTGGGGTGTC
GCGCCGTCGC TGGCGTTCGG TCTCGGCACG CCGACGCGCG TCACGCTCGG CTATTTTCAC
CAGTACGACA ACAACCTGCC CGACTACGGG CTGCCGGCGC ACAACGGCCA GGTGCTGGCC
GGCGTGTCGC GCGACAGCTA TTTCGGCTGG CGCAATCTCG ATCGCGAACG CATCACGTCG
GACGCGTTCA CCGTGAAGGC CGAACACGAC GTGTCGTCCA GCCTGAAGGT GCAGAACCTG
AGCCGCTATG CGCACCTGAA TCGCGACACC GTGATTTCCG CGTCGCACGT GAACCTGCAG
GGGCTGCCGC CCGGGCGCTA CAAGCCGGCC GGGCCGCAGG GCTACGGCCG CGATGCGTCG
ACCGCGATGT GGGCGAACCA GACGAACATC ACGAGCGAGT TCGCGACGCT CGGGATCGGG
CACACGCTCG TCACCGGCTT CGAGATCTCG CGGGAAACGT ACGGCCGCAC GACCTATTCG
TACGGGCTCA ACCGGTTCTA TCCGGCCGAC GGTTTCGCGC TCGCCGCGCC GCCGGGCATC
TGGCAAGGGC CCGCGCGGCG CCAGGACAGC GCGCGCAACG ACACGGCGCT CGTCGTGAAG
GCGCTGTACG CGTTCGACAC GATCTCGCTC GGCCGGAATT GGGATGTCGA CGTCGGGCTG
CGGCACGACT GGATCGACGG CTGGGCGGAA AGTACGCCGG CCGGCAAACC GACCGAGCGC
GCGGACAGCG GCGACCGTCA TCTGAGCACG CGCGCGGCCC TCGTGTTCAA GCCGACCGAC
AACGGCCGCG CGTATTTCGC CTATGGCACA TCGTTCAACC CGTCTGCCGA ATTTCTCGTG
ACCACCGGCT CCGGCGTGAG CGCGGCGACC GGTGCGCTCG CCCCCGAGAA AAACGAGAGC
TTCGAGCTCG GCGCGAAATG GGAAGGGCTC GCGGGCATCG CGCTGAACGG CGCGCTGTTC
CAGACCGAAA AGAAGAACGC GCGCGAACGA ATGGCCGACG GCGGCTACGC GCTCGTGGGC
CGGCAGCGCG TGCGCGGTGT CGAACTCGGT GCCGCCGGCA AGGTGACGCC GCGCTGGGAC
CTGTTCGCGA ACTACACGTA TCTGGCGAGC GTCACGCTCA GTTCGCCGGC CACGCCGCGC
CGCGGGGGCC AGGCGCTCGG CAACACGCCG CGGCATGCGT TCAACGTGTG GACGACCTAT
CGATTGCCGG CGGGCTGGAC GATGGGCTAC GGTTCGCACT TCGTCGGCCG GCGCAACGTG
ACGTCGCAAG GCGACGGCAA GCTTGGCGCG TACTGGGTGC ACAGCCTGAT GGCCGGCTAC
GAGGTGAGCC GCCGGCTGCG CTTCCAGCTG AACGTCGACA ACCTGTTCGA TCGTGCGTAT
GTCGAACGCG TGCGGCAGGT GTCGGGAAGC GAATCGCGAT CGTCCGCGGT CGAGCTCGGC
GACGGCCGCT CGGCGATGCT GTCGGCCGTG TACACGTTCT GA
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| Protein sequence | MSRCIQSRAT PPRRASASVA FAMMTCAAAP ACADEGEPRH APHLNPIFVH GERDAGSRVD
RSGSAKYATP LLDVPQTITV VPRVVLDEQQ ALSLREALSN VAGITFNAGE GGGGSGDMFN
IRGFSANANM QIDGLRDSAQ NNRSDLFNIE AVEVIKGPNS VFGGAGTTGG SVNLVSKTPK
AGASTEAGTM LGTSGYRRVT LDANRPLPGT DDRAAFRLNA MAHVNEVPGR DDIRKRRWGV
APSLAFGLGT PTRVTLGYFH QYDNNLPDYG LPAHNGQVLA GVSRDSYFGW RNLDRERITS
DAFTVKAEHD VSSSLKVQNL SRYAHLNRDT VISASHVNLQ GLPPGRYKPA GPQGYGRDAS
TAMWANQTNI TSEFATLGIG HTLVTGFEIS RETYGRTTYS YGLNRFYPAD GFALAAPPGI
WQGPARRQDS ARNDTALVVK ALYAFDTISL GRNWDVDVGL RHDWIDGWAE STPAGKPTER
ADSGDRHLST RAALVFKPTD NGRAYFAYGT SFNPSAEFLV TTGSGVSAAT GALAPEKNES
FELGAKWEGL AGIALNGALF QTEKKNARER MADGGYALVG RQRVRGVELG AAGKVTPRWD
LFANYTYLAS VTLSSPATPR RGGQALGNTP RHAFNVWTTY RLPAGWTMGY GSHFVGRRNV
TSQGDGKLGA YWVHSLMAGY EVSRRLRFQL NVDNLFDRAY VERVRQVSGS ESRSSAVELG
DGRSAMLSAV YTF
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