| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_2972 |
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| Symbol | |
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| ID | 4310559 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 3277381 |
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| End bp | 3278976 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638150812 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_774862 |
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| Protein GI | 115353023 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACGCCA AGCTGTTCAC CGCGGCCGCG CTCGCCGCCG CCCTCGCCGC TCCCGGCCTC
GCCGTCGCCA AGCCGCTCAC CGTCTGCACG GAATCGAGCC CGGACGGCTT CGACGTCGTG
CAGTACAACT CACTCGTCAC CACCAATGCG TCGGCCGACG TGATCTTCAA CACGCTCGTG
TCGTACGACG AAGCCGCGAA GAAGGTCGTG CCGGCGCTCG CCGACAAATG GGAAGCCAGC
GCCGACGGTC TCACGTACAC GTTCCACCTG CGGCCGAACG TCGCGTTCCA GACGACCGAC
TACTTCAAGC CGGGCCGCCC GCTGAACGCG GACGACGTCG TGTTCACGTT CTCGCGGATG
CTCGACGACG CGAACCCGTG GCACAAGGTG GCCGGCGCGA GCGGCTTTCC GCACGCGCAG
TCGATGGGCC TCGTGAAGCT CGTGAAGTCG GTCACGAAGG TCGACGACAG CACGGTGAAG
TTCGTGCTGA ACGAGCCGAA CGCGACGTTC GTGTCGATCC TGACGATGGG CTTCGCGTCG
ATCTACTCGG CCGAATACGC GGACCAGCTG CTGAAGGCCG GCAAGCAGGC CGATCTAAAC
GCGAAGCCGG TCGGCACCGG CCCGTTCGTG CTGAAGAGCT ACACGAAGGA CGCGCTGATC
CGCTACGACG TGAACCCGAC CTACTGGGGC ACGAAGCCGA AGGTCGACCG GCTGATCTAC
GCGATCACGC CGGACGCGTC CGTGCGCATG CAGAAGGTGA AGGCCGGCGA ATGCCAGATC
GCGCTGTCGC CGAAGCCGCA GGACGTGCTC GCCGCGAAGG GCGAAAGCGC GCTGAAGGTC
GTGCAGACGC CCGCGTTCAT GACCGCGTTC GTCGCGCTGA ACACGCAGAA GAAGCCGCTC
GACAACGAGA AGGTGCGCGA GGCGCTGAAC CTCGCGTTCG ACCGCACGAC CTACCTGAAG
GTCGTGTTCG ACAACACGGC GACCGCCGCG AACAACCCGT ATCCGCCGAA CACGTGGAGC
TACGCGAAGG ACATCGCGCC GTATGCGTAC GATCCCGCGA AGGCGAAGCA GCTGCTCGCG
TCGGCCGGGT TCCCGAACGG CTTCTCGACG ACGATCTGGA CGCGCCCGAC GGGCAGCGTG
CTGAACCCGA ACCCGAAGGC CGGCGCGGAG CTGCTGCAGG CCGACCTCGC GAAGATCGGC
GTGAAGGCCG AGGTGAAGGT GATCGAATGG GGCGAGCTGA TCAAGCAGGC GAAGCTCGGC
CAGCATGACA TGCTGTTCAT GGGCTGGGCC GGCGACAACG GCGATCCGGA CAATTACCTG
TCGCCGCTGT TCAGCTGCAA CGCGGTGAAG TCGGGCATCA ACTTCGCGCG CTTCTGCGAC
GCGCAGCTCG ACAAGCTGAT CGCCGACGGC AAGGCGACCG CCGATCAGGC CAAGCGCGCG
AAGCTGTACG AATCGGCGCA GAAGGTGATC CACGACCAGG CGCTGTGGAT TCCGCTCGGC
TACCCGACCG CCGCCGCGCT CACGCGCCCG AACGTGAGCG GCTATCACGT CAGTCCGTTC
GGCCGCCAGA ACTTCACGAC CGTCTCCGTG CAGTAA
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| Protein sequence | MHAKLFTAAA LAAALAAPGL AVAKPLTVCT ESSPDGFDVV QYNSLVTTNA SADVIFNTLV
SYDEAAKKVV PALADKWEAS ADGLTYTFHL RPNVAFQTTD YFKPGRPLNA DDVVFTFSRM
LDDANPWHKV AGASGFPHAQ SMGLVKLVKS VTKVDDSTVK FVLNEPNATF VSILTMGFAS
IYSAEYADQL LKAGKQADLN AKPVGTGPFV LKSYTKDALI RYDVNPTYWG TKPKVDRLIY
AITPDASVRM QKVKAGECQI ALSPKPQDVL AAKGESALKV VQTPAFMTAF VALNTQKKPL
DNEKVREALN LAFDRTTYLK VVFDNTATAA NNPYPPNTWS YAKDIAPYAY DPAKAKQLLA
SAGFPNGFST TIWTRPTGSV LNPNPKAGAE LLQADLAKIG VKAEVKVIEW GELIKQAKLG
QHDMLFMGWA GDNGDPDNYL SPLFSCNAVK SGINFARFCD AQLDKLIADG KATADQAKRA
KLYESAQKVI HDQALWIPLG YPTAAALTRP NVSGYHVSPF GRQNFTTVSV Q
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