Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_2929 |
Symbol | actP |
ID | 4310673 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | - |
Start bp | 3229759 |
End bp | 3231444 |
Gene Length | 1686 bp |
Protein Length | 561 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638150769 |
Product | acetate permease |
Protein accession | YP_774819 |
Protein GI | 115352980 |
COG category | [R] General function prediction only |
COG ID | [COG4147] Predicted symporter |
TIGRFAM ID | [TIGR00813] transporter, SSS family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.984405 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGACTCA CTTCGAGCGC GCTCGGCGCG CTGGCCGTTC TCGTTTCCTC CACTGCGCAC GCGACCTCCG TCGCGGGCCC GATGCCCGAC AAGGTCGAGC TGAACCCGGT CGCGATCGCG ATGTTCTTCG CGTTCGTGTT CGCGACGCTC GCGCTCACGC GCTGGGCCGC GCGCCGCACG CGCTCGACGC GCGACTTCTA CACGGCCGGC GGCGGCATCA CCGGGCTGCA GAACGGGCTC GCGATCGCGG GCGACTACAT GTCGGCCGCG TCGTTCCTCG GGCTCTCCGG GATGGTGTTC ATGTTCGGCT TCGACGGGCT GATCTACTCG ATCGGCTTCC TGGTCGGCTG GCCGTTCGTG ATGTTCCTGA TCGCCGAGCC GCTGCGCAAT CTCGGCAAGT TCACGTTCGT CGACGTCGTC GCGTACCGCT TCGCGCAGCG GCCGATCCGG CTGCTGACGT CCGCGAACGC GCTGACGATC GTCGTGCTGT ACCTGGTCGT GCAGATGGTC GGCGCGGGCA AGCTGATCCA GCTGCTGTTC GGGCTGTCGT ACGGCACGGC CGAACTGATC GTCGGCGTGC TGATGGTCGT CTACGTGTTC TTCGGCGGGA TGACCGCGAC CACCTGGGTG CAGGTGATCA AGGCCGTGCT GCTGCTGTGC GGCGCGACGC TGCTCGTATT GCTCGCGCTC GGGGAATTCG GCTTCAGCGT CGACGAGATG TTCCGCCGCG CGGTGGCCGT GCATCCGGGC GCGCTGTCGA TCATGGGCCC CGGCAAGCTG ATTCGCGATC CGGCCAACGC GCTGTCGCTC GGCATCGCGC TGATGTTCGG CACGGCCGGC TTCCCGCACA TCCTGATGCG CTTCTTCACG GTGCCGAACG CGAAGGAGGC GCGCAAGTCG GTGCTGTACG CGACCGGCTT CATCGGCTAC TTCTATTTGC TGACCTTCGT GATCGGCTTT TCGGCGATCG TGCTGCTCGC GCAGCATCCG GAATTTTTCC GGCTCGGCGC GAACGGCACG TTCAACCTGA CGCACGACCT GCTCGGCGGC TCGAACATGG TCGCGGTGAA GCTCGCGCAG GCGGTCGGCG GCAACTGGTT CTACGGCTTC ATCGCGGCCG TCACGTTCGC GACGATCCTC GCGGTGGTCG CCGGGCTGAC GCTCGCCGGC GCGACCACGA TCTCGCACGA CCTGTATGCG CAGATGTGGG CGCGCGGCAA GCCCGACGAG CGGCTGGAAA TGCGCATCTC GCGCGCGGCG ACGATCGGGT TGTCGGCGAT CGCGATCGCG TTGTCGATCC TGTTCGAGCA CGTGAACGTC GCGTTCATGG TCGGCCTCGT CGCGGCGGTG GCCGCCAGCG CGAATTTCCC GGTGCTCGCG ATGTCGATCT TCTGGCGCGG GATGACGACG CGCGGCGCGG TGCTCGGCGG CGGCCTCGGC CTCGCGTCGG CGGTCGCGCT CACGGTGCTG TCGAAGTCGG TGTGGGTCGA CGTGCTGCAC CACGCGCACG CGCCGGTGTT CCTCGACAAT CCGGCACTCG TGTCGGTGCC GCTCGCGTTC TTCGGGATCG TGGTCGGCTC GCTCGCGGAC CGCGGCGAGC GCGCGCGGCG CGAGCGCGAC GCGTTCGCGC AGCAGGAGTT CTACGCGCAG ACGGGCGTGC TGGCCAGCCG CGCCGTGCAG CACTGA
|
Protein sequence | MRLTSSALGA LAVLVSSTAH ATSVAGPMPD KVELNPVAIA MFFAFVFATL ALTRWAARRT RSTRDFYTAG GGITGLQNGL AIAGDYMSAA SFLGLSGMVF MFGFDGLIYS IGFLVGWPFV MFLIAEPLRN LGKFTFVDVV AYRFAQRPIR LLTSANALTI VVLYLVVQMV GAGKLIQLLF GLSYGTAELI VGVLMVVYVF FGGMTATTWV QVIKAVLLLC GATLLVLLAL GEFGFSVDEM FRRAVAVHPG ALSIMGPGKL IRDPANALSL GIALMFGTAG FPHILMRFFT VPNAKEARKS VLYATGFIGY FYLLTFVIGF SAIVLLAQHP EFFRLGANGT FNLTHDLLGG SNMVAVKLAQ AVGGNWFYGF IAAVTFATIL AVVAGLTLAG ATTISHDLYA QMWARGKPDE RLEMRISRAA TIGLSAIAIA LSILFEHVNV AFMVGLVAAV AASANFPVLA MSIFWRGMTT RGAVLGGGLG LASAVALTVL SKSVWVDVLH HAHAPVFLDN PALVSVPLAF FGIVVGSLAD RGERARRERD AFAQQEFYAQ TGVLASRAVQ H
|
| |