| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_2881 |
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| Symbol | |
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| ID | 4310730 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 3176473 |
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| End bp | 3178230 |
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| Gene Length | 1758 bp |
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| Protein Length | 585 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638150721 |
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| Product | PTS system, N-acetylglucosamine-specific IIBC subunit |
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| Protein accession | YP_774771 |
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| Protein GI | 115352932 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1263] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific
[COG1264] Phosphotransferase system IIB components |
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| TIGRFAM ID | [TIGR00826] PTS system, glucose-like IIB component
[TIGR01998] PTS system, N-acetylglucosamine-specific IIBC component |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGGGA ATCCGTTTCT GAAGATACAG GGCCTGGGCC GGGCGCTGAT GCTGCCGATC
GCGGTGTTGC CGGTCGCCGG CATCCTGCTG CGGCTCGGGC AGCCGGATGT GTTCAACATC
AAGATGATCG CCGACGCCGG CGGCGCGATC TTCGACAACC TGCCGCTTCT GTTCGCGATC
GGCGTGGCGG TCGGTTTCGC GAAGGACAAC AACGGCGTGG CGGCACTCGC GGGCGCGATC
GGCTACCTGA TCGAAACCGC GATCATGAAG GACATCGATC CCAAGCTGAA CATGGGCGTG
CTGTCCGGGA TCATCGCGGG CGTGGTCGCG GGGCTGCTGT ACAACCGCTA CAAGGACATC
AAGCTGCCGG ACTACCTCGC GTTCTTCGGC GGCAAGCGGT TCGTGCCGAT CATCACGGGG
CTGGTGTGCG TGATACTCGG CATCGTGTTC GGATACGTGT GGCAGCCGGT CCAGCACGCG
ATCGACGCGG CCGGCCAGTG GCTCACGACG GCGGGCGCGA TCGGCGCGTT CGTGTTCGGC
TTCCTGAACC GCCTGCTGCT CGTCACGGGC CTGCACCACA TCATCAACTC GCTCGCGTGG
TTCGTGTTCG GCAACTTCAC GCCGCCGGCC GGCGGCGAGA TCGTGCACGG CGACCTGCAC
CGCTTCTTCG CGGGCGATCC GACCGCGGGC ACCTTCATGG CCGGCTTCTT CCCGATCATG
ATGTTCGGCC TGCCGGCCGC GTGTCTCGCG ATGCTGCACG AAGCGCCGAA GGAGCGCCGC
GCGATGGTCG GCGGCCTGCT GTTCTCGATG GCGCTCACGT CGTTCCTGAC CGGCGTGACC
GAGCCGATCG AGTTCAGCTT CATGTTTCTC GCGCCGGTGC TGTACGTGAT CCACGCGGTG
CTCACCGGGC TGTCGCTCGC GATCTGCCAG CTGCTCGGCG TGAAGCTCGG CTTCACGTTC
TCGGCCGGCG CGATCGACTA CGTGCTGAAC TACGGGCTGT CGACGAAGGG CTGGATCGCG
ATTCCGCTCG GCATCGCGTA CGGTGTCGCG TACTACGGGC TGTTCCGCTT CTTCATCCGC
AAGTTCAACA TGGCGACGCC GGGCCGCGAG CCGGCCTCGG CCGATGCGGC GACCGAGTCG
TTCGCGTCGG GCGGTTTCGT CGCGCCGGCT GCCGGTGCCG CGGCGGCCGC GCCGCGTGCG
CTGCGTTACA TCGCCGCGCT TGGCGGGGCA GGCAATCTGA CGGTCGTCGA CGCATGCACG
ACGCGCCTGC GCCTGAGCGT CGTCGACCCG GAGAAGGTGT CGGAGCCTGA GCTGAAGTCG
ATCGGCGCGC GCGGCGTGCT CAAGCGCGGC GGCAACAGCG TGCAGGTGAT CATCGGGCCG
GAGGCCGACA TCATTGCCGA CGAGATGCGT TCGGCGATCG GCAGCGGCGC AAGCGGCGCC
GCGGCGCCGG CCACGGCCGC GCAGCCGGTC ACGGGCGCGG CGGCCGGCCC GCTCGATCCC
GATCCGCTGC GCTGGCTCGC GGTGTTCGGC GGCGCGACCA ACGTCGCGAC GCTCGACGCG
ATCGCGACCA CGCGCCTGCG TGTCGTCGTG CGCGACGCAT CGGCGGTCGA TCGCGAGCGC
CTCGGTGCAC TCGATGTCGC ATGGGTGTCG CCGGATACGT TCCACATCGT CTGCGGCAAC
GCGGCGGCAC GCTACGCCGA ACAGCTCGGC GCACGGCTGC CGTCGACGGG CGGCGGCGCG
GCCGCGCAAC CGGCCTGA
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| Protein sequence | MDGNPFLKIQ GLGRALMLPI AVLPVAGILL RLGQPDVFNI KMIADAGGAI FDNLPLLFAI
GVAVGFAKDN NGVAALAGAI GYLIETAIMK DIDPKLNMGV LSGIIAGVVA GLLYNRYKDI
KLPDYLAFFG GKRFVPIITG LVCVILGIVF GYVWQPVQHA IDAAGQWLTT AGAIGAFVFG
FLNRLLLVTG LHHIINSLAW FVFGNFTPPA GGEIVHGDLH RFFAGDPTAG TFMAGFFPIM
MFGLPAACLA MLHEAPKERR AMVGGLLFSM ALTSFLTGVT EPIEFSFMFL APVLYVIHAV
LTGLSLAICQ LLGVKLGFTF SAGAIDYVLN YGLSTKGWIA IPLGIAYGVA YYGLFRFFIR
KFNMATPGRE PASADAATES FASGGFVAPA AGAAAAAPRA LRYIAALGGA GNLTVVDACT
TRLRLSVVDP EKVSEPELKS IGARGVLKRG GNSVQVIIGP EADIIADEMR SAIGSGASGA
AAPATAAQPV TGAAAGPLDP DPLRWLAVFG GATNVATLDA IATTRLRVVV RDASAVDRER
LGALDVAWVS PDTFHIVCGN AAARYAEQLG ARLPSTGGGA AAQPA
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