Gene Bamb_2863 details

Gene Information

• Locus tag: Bamb_2863
• ID: 4310712
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia ambifaria AMMD
• Kingdom: Bacteria
• Replicon accession: NC_008390
• Strand: +
• Start bp: 3157615
• End bp: 3158223
• Gene Length: 609 bp
• Protein Length: 202 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 638150703
• Product: 50S ribosomal protein L25/general stress protein Ctc
• Protein accession: YP_774753
• Protein GI: 115352914
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG1825] Ribosomal protein L25 (general stress protein Ctc)
• TIGRFAM ID: [TIGR00731] ribosomal protein L25, Ctc-form

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.000420002
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAGTCG TCGCTTTCGA GCGCCAAGAG CAAGGTACGG GTGCGAGCCG CCGCCTGCGC 
AACGCTGGTA AGACCACGGG TATCGTCTAC GGTGGCGAAG CAGCCCCGCA AAAGATCGAA 
CTCGATCACA ACGCGCTGTG GCACGCACTG AAGAAGGAAG CCTTCCACTC GTCGATCCTC 
GATCTCGAAG TGGCCGGCCA GTCGCAACAG GTTCTGCTGC GCGACGTGCA ATACCACCCG 
TTCAAGCAAC TCGTGCTGCA CGTTGACTTC CAACGCGTCG ACGCGAAGAA GAAGCTGCAC 
ACGAAGGTGC CGCTGCACTT CCTGAACGCT GAAGTCAGCC CGGCAGTGAA GCTGTCGAGC 
GCAGTCGTCT CGCACGTCGC GACGGAAATC GAAATCGAGT GCCTGCCGTC GGCACTGCCG 
GAATTCCTCG AAGTCGACCT GTCGAAGATC GAAGCAGGTC AGTCGCTGCA CGCGAAGGAC 
ATCGCTCTGC CGAAGGGCGT GGCGCTGGTC GCGCACATCG ACGCGGAAAA CCCGGTTGTC 
GCATCGGCGA CGATCCCGGC TGGCGCCGTG TCGGACGCAG CAGGCGAAGG CGAAACGCCG 
GCTGCCTAA 

 

Protein sequence

MKVVAFERQE QGTGASRRLR NAGKTTGIVY GGEAAPQKIE LDHNALWHAL KKEAFHSSIL 
DLEVAGQSQQ VLLRDVQYHP FKQLVLHVDF QRVDAKKKLH TKVPLHFLNA EVSPAVKLSS 
AVVSHVATEI EIECLPSALP EFLEVDLSKI EAGQSLHAKD IALPKGVALV AHIDAENPVV 
ASATIPAGAV SDAAGEGETP AA