Gene Bamb_2860 details

Gene Information

• Locus tag: Bamb_2860
• Symbol: lolB
• ID: 4310709
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia ambifaria AMMD
• Kingdom: Bacteria
• Replicon accession: NC_008390
• Strand: +
• Start bp: 3154787
• End bp: 3155407
• Gene Length: 621 bp
• Protein Length: 206 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 638150699
• Product: outer membrane lipoprotein LolB
• Protein accession: YP_774750
• Protein GI: 115352911
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG3017] Outer membrane lipoprotein involved in outer membrane biogenesis
• TIGRFAM ID: [TIGR00548] outer membrane lipoprotein LolB

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.00718915
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGGATGT TCCCGATGCT TTCCCTGTCT TCCCGCGCGC TGCGCACGCT GGCCGCGGCC 
GGCGCGGCGC TCGCGCTCGC CGGCTGCGCG AGCACGCCGC CGTCGGCGAA CGCGCCGGCC 
GGCGCCCCTT TGCAGACGGC CGCGACGCAT GCATACCATG GCCGCTTCGC GGTGCAGTAC 
AACGACCGCC TCGGCAGGCA GCAAAACGTG TACGGCAACT TCGACTGGCT GGAGCACGGC 
GACGACGTGT CGCTCGAGCT GCGCAGCCCG CTCGGCCAGA CACTCGCAAT CGTGAAATCG 
ACGCCGCAGA CCGCAACGCT CGAACTGCCG AACCGCCAGC CGCAATACGC GACCGACGTC 
GGCGAGCTGA TGCAGAACAC GCTCGGCTTC TCGCTGCCGC TGGCCGGCCT GCGCTACTGG 
CTGCTGCCGA CGCCCGCGCC CGCGACGCCC GCGCAGACGG TGCGCGACCC GGCCGATACG 
ACGCACGTGA AGCAGATTCG CCAGGACGGC TGGACGATCG ACTACCTCGC CTACGCGGAC 
GCACCGGCCA CCGGCGTCAA ACGCGTGAAC CTCGTGCGCG CGACGCCGCC GCTCGACATC 
AAGCTCGTGC TCGACCAGTA A 

 

Protein sequence

MRMFPMLSLS SRALRTLAAA GAALALAGCA STPPSANAPA GAPLQTAATH AYHGRFAVQY 
NDRLGRQQNV YGNFDWLEHG DDVSLELRSP LGQTLAIVKS TPQTATLELP NRQPQYATDV 
GELMQNTLGF SLPLAGLRYW LLPTPAPATP AQTVRDPADT THVKQIRQDG WTIDYLAYAD 
APATGVKRVN LVRATPPLDI KLVLDQ