Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_2831 |
Symbol | |
ID | 4310838 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | - |
Start bp | 3120738 |
End bp | 3123401 |
Gene Length | 2664 bp |
Protein Length | 887 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638150670 |
Product | fimbrial biogenesis outer membrane usher protein |
Protein accession | YP_774721 |
Protein GI | 115352882 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3188] P pilus assembly protein, porin PapC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCGCTCG GCTTCGTGAC GCCCGCCCAC GCGCTCCAAG CGGCGCCAGT CGGCCGCGAG GCCGACGGCG CAACCGCTCT CGCGTACAAC TTCGACAGCC GGCTGCTGCT GGGCACGCCG CTCGGCGTCG CGAATATCGA GCGCTTCAAC CGCACGCATG CCGTCGATCC CGGACGATAC CAGGTCGATC TGTACGTGAA CGATCGCTTC GTTTCGCGGC GCGACATCAC GTTCCGCAAT ACAGATGACG GCGCGCTTTA CCCGTGCCTC AGCGATGCAC TGCTGACGTC CGCGGGCGTA TTGCTGCGCG ACGTCGCGGA TGCCCGCTTG CCGCACGCCG CGGCCGGACA GGCTGCGCCC GACGGCACGC AACCTTCACC CGAACCAACA CCGGATCACG CGGACGCGCT CCCGGCGGAT GCACCGACGG CATTCTGCGG CCCGCTGACG AAGCGCGTGC CGGGCGCGCA GACCACGTTC GATCTGACGC GCCTGCGGCT CGACATCACC GTCCCGCAGT TCGAGATGAG AGTCGCACCG CGCGGCGCAG TCGATCCCGC ATCGCTGGAC GCGGGCGAAG CCGCCGCGTA CGTGAACTAC GACGCGAGCT ACTACACATC TTCGGCGTAC GGCGTGCGCG CGAATTCGGT CTACACGGGC CTCAATGCAG GCGTGAACGT CGGCCTGTGG CGTGTGCGCC AGCAGTCGTC GTTCACCTAC AATGGAGGCA CCGGCAACAG CATCTCCCGC TGGAACAACA TCCGCACCTA TGCGGAGCGG CCGCTGATCG GCATGCGCAG CCAGCTCACC ATCGGCCAGA GCTTCACGAG CGGCAGCCTG TTCAGCACGG TGGGCTATAC GGGCGTGCGC CTGGAATCCG ACGATCGCAT GCTGCCCGAC TCGATGCGCG GCTACGCGCC GGTCGTCAAT GGCGTCGCGC AGACCAACGC GCGCGTCGTC GTGAACCAGA ACGGCCACGT GATCTACCAG ACGACGGTGG CCCCCGGGCC GTTCCGGATC GCGGACCTGA ATCCGACCAG CTACCAGGGC GATATCGACG TCGAGGTGCA CGAGGCGAAC GGCCAGGTGT CGCGCTTCAC GGTGCCGTTC TCCGCAGTGC CGAATTCGAT GCGCCCCGGC CTGTCGCACT ACAGCGTCAC GCTCGGCCAG GTGCGGCAAA TCGAAGGCTC GCACGCGAGA TTCGCCGACC TGACCTACCA GCGCGGCCTG ACCAATTCGC TGACGGCCAA CGGCGCCGTG CGCGTCTCGC TCGACTATCA GTCGGTGCTG GCCGGCGCCG TGCTAGGCAC GCGGATCGGC GCGTTCGGCT GGAACACGAC CTGGTCTCAC GCGCGCAACG CGCAGGGCGG CTGGCTGAAC GGCTGGATGA GTGCCATCAC GTACAGCCAC ACCTTCACGC CGACCCAAAC GACCTTCTCG CTGGCCGGCT ATCGCTATTC GACGAAAGGC TATCGCGAGT TCATCGACGC GCTCAGCGCG CGCGAAGCTT ACCGGCGCGG CGAAACCTGG GCGTCGTCGA CCTACCAGCA GCGCGACCAG TTCACGCTCA ACGTGAACCA GGATTTCGGC AAGTACGGCG CACTGTCGCT GTCCGCCACG ACCAGCAGCT ACTACGAGTC GCGGCCGCAC GACACGCAGG TCCAGCTCAG CTACAACAAC CACTACCACT CGATCAGCTA CAACCTGTCG TTCGTCCGGC AGAAGACGGC CACCGTCGTC GCGCCGGGCA GCGGGCCGAT GCAGAACCTC CTGCCCGGCT ACGGACGGGC GGGCGCGGAC ACGCGGACGA GCAACGTGCT GATGCTGACC GTCTCGATCC CACTCGGATC GGGGCCGCGC ACCGCATCGC TGTCGGGCAG TGTGTCGCAC GGCAACGATC AGGGCACGTC GTACCAGGCG TCGCTCAGTG GCATTGCCGA CCGCGCCCAG ACGCTCAGCT ACGGCCTCAG CCTGTCGGGC GAAACGCGCA ACGGCGCGCG TACCTACAGC GGCAACCTGC AGAAGAACCT GTCAATGATC ACGGCGGGCG CGAGTTATTC GAACGGCGAT CATTTCTGGC AGGTCGGTGC CACCGCGCGC GGCGCGATCG TCGCGCACCG CGGCGGCGTC ACGTTCGGGC CGTATCTCGG CGATACGTTC GGCATCGTCG AGGCCAAGGG TGCGCGAGGC GCGACCGTGC GCAGCGGGAT GGGCGCGCGC GTCGACCGCT TCGGCTACGC GATCGTGCCG TCGCTCACGC CCTACCGCTA CACGGACGTT GCGCTCGAAA CACAAGGCAT CGACCGCGAC ACTGAACTGA TCGGCAACCA GGTGCGGGTC GCGCCGTATG CGGGCTCGGC CGTGCTGCTC AAGTTCGCGA CACTGACCGG CCATGCGGTC CTGATCCAGG GTGCGCGCGC CGACGGCGAA CGGCTGCCGC TGGGCGCGAA CGTGCTGGAC GGCAAGGGCA CGTCGATCGG CGTGGTCGGG CAAGGCGGGC TCGCCTATGC GCGCGTGCCG TCGGCGCACG GTACGGTCAG GGTCCGCTGG GGCAAGCGGC GTGAGGACCA GTGCGCGATG CGCTACGACC TGCCCGCGCA GTCGGCGACG AAGGCGCCGA TCGTGCGCAT TCGCGCGCAA TGCCTGCCGC TCGCGCTGAA ATGA
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Protein sequence | MALGFVTPAH ALQAAPVGRE ADGATALAYN FDSRLLLGTP LGVANIERFN RTHAVDPGRY QVDLYVNDRF VSRRDITFRN TDDGALYPCL SDALLTSAGV LLRDVADARL PHAAAGQAAP DGTQPSPEPT PDHADALPAD APTAFCGPLT KRVPGAQTTF DLTRLRLDIT VPQFEMRVAP RGAVDPASLD AGEAAAYVNY DASYYTSSAY GVRANSVYTG LNAGVNVGLW RVRQQSSFTY NGGTGNSISR WNNIRTYAER PLIGMRSQLT IGQSFTSGSL FSTVGYTGVR LESDDRMLPD SMRGYAPVVN GVAQTNARVV VNQNGHVIYQ TTVAPGPFRI ADLNPTSYQG DIDVEVHEAN GQVSRFTVPF SAVPNSMRPG LSHYSVTLGQ VRQIEGSHAR FADLTYQRGL TNSLTANGAV RVSLDYQSVL AGAVLGTRIG AFGWNTTWSH ARNAQGGWLN GWMSAITYSH TFTPTQTTFS LAGYRYSTKG YREFIDALSA REAYRRGETW ASSTYQQRDQ FTLNVNQDFG KYGALSLSAT TSSYYESRPH DTQVQLSYNN HYHSISYNLS FVRQKTATVV APGSGPMQNL LPGYGRAGAD TRTSNVLMLT VSIPLGSGPR TASLSGSVSH GNDQGTSYQA SLSGIADRAQ TLSYGLSLSG ETRNGARTYS GNLQKNLSMI TAGASYSNGD HFWQVGATAR GAIVAHRGGV TFGPYLGDTF GIVEAKGARG ATVRSGMGAR VDRFGYAIVP SLTPYRYTDV ALETQGIDRD TELIGNQVRV APYAGSAVLL KFATLTGHAV LIQGARADGE RLPLGANVLD GKGTSIGVVG QGGLAYARVP SAHGTVRVRW GKRREDQCAM RYDLPAQSAT KAPIVRIRAQ CLPLALK
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