Gene Bamb_2813 details

Gene Information

• Locus tag: Bamb_2813
• ID: 4310820
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia ambifaria AMMD
• Kingdom: Bacteria
• Replicon accession: NC_008390
• Strand: +
• Start bp: 3102660
• End bp: 3104489
• Gene Length: 1830 bp
• Protein Length: 609 aa
• Translation table: 11
• GC content: 72%
• IMG OID: 638150652
• Product: Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases-like protein
• Protein accession: YP_774703
• Protein GI: 115352864
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases; [COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATTCAT GGCCGGCGCG GCGCCGCATC GCGGCCGCGC CGGTCACCGC TTCCCGCTCT 
AGCCGATTTA TGCCGACTCA CCCGCTGGTA TTCCATTCGT CGCCGGACCA GACGATCGCC 
TGGCGCGACG GCGCGCCCGT CACCGTGCGC GCGTTCGTCG CCGACGTCGC GCGCGTGGCC 
GCCGCGCTGC CCGCCGGCGG CCACGTGTTC AACGTGTGCC GCGACCGCTA CCGCTTCGCG 
GTCAGCCTGT GCGCGGCGCT TGTGTCCGGC AGGATCAGCC TGCTGCCGTC GACGCATACG 
CCGGAGATGG TGCGCCAGCT CGCGTCGTTC GCACCTGACG CGTTCTGCCT GCACGACGCG 
CCCGACTGCA CGATCGACCT GCCGCGCTTC GCGTATCCGG ACGCCTCCGC CGGCGACCTC 
CGCGACGACA CACCCTGCAT GGTGCCGCGG ATCGACGCAG CGCGGATCAT GGCGTACGTG 
TTCACCTCCG GCTCGACCGG CGCGCCGGTG CCGCACCGCA AGACCTGGGG CTTCCTGGTC 
GGCTGCGTGC GCGCGGCGGC CGACCGCCTC GGCCTGCTCG ACGGCCGCGC GGCCACGCTG 
ATCGGCACCG TGCCCGCGCA GCACATGTAC GGCTTCGAGT CGACGGTGTT GCTCGCGCTG 
ATCGGCGGCC TCGCGTTCAG CAATCGCCAG CCGTTCTATC CGCGCGACAT TCGCGACGAA 
CTCGACGCGA TCCCGCAGCC GCGCGTGCTC GTCACGTCGC CGATCCACCT GCGCGCGCTG 
CTGTCGGCCG GCCATGCGCT GCCGCCGGCC GCGCTCGTGC TGTCGGCCAC CGCGCCGCTG 
TCGGAAAAAC TCGCGTGCGA AGCCGAGGCC GCGCTCGGCG CGCCGCTCGT CGAAATCTAC 
GGCAGCACCG AGACCGGGCA GATCGCGACG CGCCGCACGT CGCAGGGCGC GACCTGGCAA 
GTGTTCCCGG GCATCCGGCT CGATGCGCGT GATGCGCATG ACGCGTCGCA CGGCGAGGCC 
GCGGCCGACG ACAGTGGCCC GACCATGTGG GTATCGGGCG GACACGTCGA GGCCCCCGTG 
CCGATGGGCG ACGCGCTCGA GCTGCTCGGC GACGGCCGGT TCCTGCTGCA TGGCCGCAAG 
GCGGACCTCG TCAACATCGC CGGCAAGCGC ACGTCGCTCG CCTATCTGAA TCATCAATTG 
AACGCGATTG CCGGCGTCGT CGACGGCGTG TTCTTCATGC CGGACGAAGC CGCGCCGGCC 
CACGCCGATG CGACCCGCGA ACCGGTCACG CGCCTCGTCG CGCTCGTGGT CGCCCCGACG 
CTCGCCGCGG CCGATCTGCA GCGCGCGCTG CGCGAACGGA TCGATCCCGC GTTCATGCCG 
CGTCCGCTCG TGTTCGTCGA TACGTTGCCG CGCAACGAAA CGGGCAAGCT GCCGCGCGAC 
GTGCTCGCCG CGCTCGTCGC ACGGCACACG CGCGCCGCCA CGGCCGACGT GCGCGATCGC 
AGCGAGACGG ATGCGCCGCT CGCGTTCACG ATTCCCGCCG ATCACCCTGC GCTGCCCGGT 
CATTTCCCCG GTCATCCGAT CGTGCCGGGC GTCGTGCTGC TCGATCACGC GATCGCCGCG 
CTCGGCGCAT CGCTGAACCG CCCGCTGGAT ACGTGGCGGC TCGCTTCCGC GAAATTCCTG 
AGCCCGGTCG CGCCCGGCGA ACCGCTCGAT CTCGCGTTCG ATGCGGCGGC AGGCGGTGCA 
ATCCGCTTCA CGCTGCGCGC CGGCACGCGC GACGTCGCGA CCGGCGTGCT GTCCGCGCCG 
CCAGCCGCAC CGGAAGGCGC GCAGCCATGA 

 

Protein sequence

MNSWPARRRI AAAPVTASRS SRFMPTHPLV FHSSPDQTIA WRDGAPVTVR AFVADVARVA 
AALPAGGHVF NVCRDRYRFA VSLCAALVSG RISLLPSTHT PEMVRQLASF APDAFCLHDA 
PDCTIDLPRF AYPDASAGDL RDDTPCMVPR IDAARIMAYV FTSGSTGAPV PHRKTWGFLV 
GCVRAAADRL GLLDGRAATL IGTVPAQHMY GFESTVLLAL IGGLAFSNRQ PFYPRDIRDE 
LDAIPQPRVL VTSPIHLRAL LSAGHALPPA ALVLSATAPL SEKLACEAEA ALGAPLVEIY 
GSTETGQIAT RRTSQGATWQ VFPGIRLDAR DAHDASHGEA AADDSGPTMW VSGGHVEAPV 
PMGDALELLG DGRFLLHGRK ADLVNIAGKR TSLAYLNHQL NAIAGVVDGV FFMPDEAAPA 
HADATREPVT RLVALVVAPT LAAADLQRAL RERIDPAFMP RPLVFVDTLP RNETGKLPRD 
VLAALVARHT RAATADVRDR SETDAPLAFT IPADHPALPG HFPGHPIVPG VVLLDHAIAA 
LGASLNRPLD TWRLASAKFL SPVAPGEPLD LAFDAAAGGA IRFTLRAGTR DVATGVLSAP 
PAAPEGAQP