Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_2787 |
Symbol | |
ID | 4310361 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | + |
Start bp | 3074905 |
End bp | 3076428 |
Gene Length | 1524 bp |
Protein Length | 507 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638150626 |
Product | threonine dehydratase |
Protein accession | YP_774677 |
Protein GI | 115352838 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1171] Threonine dehydratase |
TIGRFAM ID | [TIGR01124] threonine ammonia-lyase, biosynthetic, long form |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCATCCC ACGATTACCT GAAGAAAATC CTCACCGCGC GCGTCTACGA CGTCGCGCTC GAGACGGAAC TCGAACCCGC CCGCAACCTG TCGGCCCGAC TGCGCAACCC CGTTTACCTG AAGCGCGAGG ACAACCAGCC GGTGTTCTCG TTCAAGCTGC GCGGTGCGTA CAACAAGATG GCGCACATTC CGGCCGACGC GCTCGCGCGC GGCGTGATCA CGGCATCGGC CGGCAATCAT GCGCAGGGCG TCGCGTTCTC GGCGGCCCGG ATGGGCATCA AGGCCGTCAT CGTCGTGCCC GTCACGACGC CGCAGGTGAA GGTCGACGCG GTGCGCGCCC ACGGCGGCCC GAGCGTCGAG GTGATCCAGG CGGGCGAGTC GTACAGCGAT GCGTATGCGC ATGCCGTGAA GGTGCAGGCC GAACGCGACC TCACGTTCGT CCACCCGTTC GACGATCCGT ACGTGATCGC CGGCCAGGGC ACGATCGCGA TGGAAATCCT GCGGCAGCAC CAGGGCCCGA TTCACGCGAT CTTCGTGCCG ATCGGCGGCG GCGGCCTCGC GGCCGGCGTG GCCGCGTACG TGAAGGCGGT GCGGCCGGAG ATCAAGGTGT TCGGCGTGCA GGCCGAGGAT TCGTGCGCGA TGGCGCAGTC GCTGGAAAAA GGCGAGCGCG TCGAGCTGAG CGAAGTCGGG CTGTTTGCGG ACGGCACCGC GGTGAAGCTC GTCGGCGAGG AAACCTTCCG GCTCTGCAGC GAGCTCCTCG ACGGCGTCGT GACGGTGGAC ACCGACGCGC TGTGCGCGGC GATCAAGGAT GTATTCCAGG ACACGCGCAG CGTGCTCGAG CCGTCCGGCG CGCTCGCGGT GGCGGGCGCG AAACGCTACG CGGAACGCGA AGGGATCGAG AACCAGACGC TCGTCGCGGT CACGTCGGGC GCGAACATGA ACTTCGACCG GATGCGCTTC GTTGCCGAAC GCGCGGAAGT CGGCGAGGCG CGCGAAGCCG TGTTCGCGGT CACGATCCCC GAGGAGCGCG GCAGCTTCAA GCGCTTCTGC TCGCTCGTCG GCGAACGCAA CGTGACCGAG TTCAACTACC GGATCGCCGA TGCGCAGGCC GCGCATATCT TCGTCGGCGT GCAGATCAAG CGGCGCGGCG AATCGGCGGA GATCGCCGCG AACTTCGAGT CGCACGGCTT CAAGACCGTC GACCTGACGC ACGACGAGCT GTCGAAGGAG CACATCCGCT ACATGGTGGG CGGCCGCTCG CCGCTCGCGC TCGACGAACG CCTGTTCCGC TTCGAATTCC CGGAACGGCC GGGCGCGCTG ATGAAGTTCC TGTCGTCGAT GGCGCCGGAC TGGAACATCA GCCTGTTCCA TTACCGTAAC CAGGGTGCGG ACTACAGCTC GATCCTCGTC GGGCTGCAGG TGCCGCAGGT CGATCGCGCC GAGTTCGAAC GCTTCCTCGC GGCGCTCGGC TATCCGTATG TCGAAGAGAG CGCCAATCCG GCGTACCGGC TCTTCCTGTC GTAA
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Protein sequence | MASHDYLKKI LTARVYDVAL ETELEPARNL SARLRNPVYL KREDNQPVFS FKLRGAYNKM AHIPADALAR GVITASAGNH AQGVAFSAAR MGIKAVIVVP VTTPQVKVDA VRAHGGPSVE VIQAGESYSD AYAHAVKVQA ERDLTFVHPF DDPYVIAGQG TIAMEILRQH QGPIHAIFVP IGGGGLAAGV AAYVKAVRPE IKVFGVQAED SCAMAQSLEK GERVELSEVG LFADGTAVKL VGEETFRLCS ELLDGVVTVD TDALCAAIKD VFQDTRSVLE PSGALAVAGA KRYAEREGIE NQTLVAVTSG ANMNFDRMRF VAERAEVGEA REAVFAVTIP EERGSFKRFC SLVGERNVTE FNYRIADAQA AHIFVGVQIK RRGESAEIAA NFESHGFKTV DLTHDELSKE HIRYMVGGRS PLALDERLFR FEFPERPGAL MKFLSSMAPD WNISLFHYRN QGADYSSILV GLQVPQVDRA EFERFLAALG YPYVEESANP AYRLFLS
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