Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_2776 |
Symbol | aspS |
ID | 4310350 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | - |
Start bp | 3061471 |
End bp | 3063273 |
Gene Length | 1803 bp |
Protein Length | 600 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 638150615 |
Product | aspartyl-tRNA synthetase |
Protein accession | YP_774666 |
Protein GI | 115352827 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0173] Aspartyl-tRNA synthetase |
TIGRFAM ID | [TIGR00459] aspartyl-tRNA synthetase, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.233707 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGATGC GTACTGAATA CTGCGGTCTC GTGACCGAAC ACCTGCTGGG CCAAACCGTG TCGCTGTGCG GCTGGGTGCA GCGCCGCCGC GATCACGGCG GTGTGATCTT CATCGACCTG CGCGATCGTG AAGGCCTCGT GCAGGTGGTG TGCGACCCGG ATCGCGCGGA AATGTTCGCG ACCGCCGAAG GCGTGCGCAA CGAGTTCTGC GTGCAGATCA AGGGTCTCGT GCGCAACCGT CCGGAAGGCA CGGTCAACGC CGGCCTGAAG AGCGGCAAGA TCGAAGTGCT GTGTCACGAA CTGAACGTGC TGAATGCGTC GGTCACGCCG CCGTTCCAGC TCGACGACGA CAACCTGTCG GAAACGACGC GCCTCACGCA CCGCGTGCTC GACCTGCGCC GTCCGCAGAT GCAGCACAAC CTGCGCCTGC GCTACCGCGT CGCGATCGAA GCGCGCAAGT ACCTCGACGA GCAGGGCTTC ATCGACATCG AAACGCCGAT GCTGACGAAG AGCACGCCGG AAGGCGCGCG CGACTACCTG GTGCCGTCGC GCGTGAACGC GGGCCAGTTC TTCGCGCTGC CGCAGTCGCC GCAGCTGTTC AAGCAGCTGC TGATGGTCGC GAACTTCGAC CGTTACTACC AGATCACCAA GTGCTTCCGC GATGAGGATC TCCGCGCCGA CCGCCAGCCG GAATTCACGC AGATCGACTG CGAGACGTCG TTCCTCGGCG AGCAGGAAAT CCGTGATCTC TTCGAAGACA TGATCCGTCA CATCTTCAAG ACGACGATCG ACGTCGAACT CGACGCGACA TTCCCGGTGA TGCCGTACTC GGAAGCGATG GCGCGTTTCG GTTCGGACAA GCCGGACCTG CGCGTGCAGC TCGAATTCAC CGAGCTGACC GACGCGATGA AGGACGTCGA CTTCAAGGTG TTCAGCACGC CGGCCAACGC GAAGGACGGC CGTGTCGCGG CGCTGCGCGT GCCGAAGGGT GGCGAGCTGT CGCGTGGCGA CATCGACGGC TACACGGAAT TCGTGCGCAT CTACGGCGCG AAGGGCCTCG CGTGGATCAA GGTCAACGAG AAGGCGAAGG GCCGCGACGG CCTGCAGAGC CCGATCGTCA AGAACCTGCA CGACGCATCG ATCGCGGCGA TCCTCGAGCG CACCGGTGCT GAAGACGGCG ACATCATCTT CTTCGCGGCC GACCGCGCGA AGGTCGTCAA CGACAGCCTC GGCGCGCTGC GCCTGAAGAT CGGTCATTCG GAATTCGGCA AGGCGAACGG CCTCGTCCAG GCCGGCTGGA AGCCGCTGTG GGTCGTCGAT TTCCCGATGT TCGAATACGA CGACGAAGAT GCGCGCTACG TCGCGGCGCA CCACCCGTTC ACGAGCCCGA AGGACGAGCA CCTCGAGTAC CTCGAGACCG ATCCGGGCCG CTGCCTCGCG AAGGCGTACG ACATGGTGCT GAACGGCTGG GAAATCGGCG GCGGCTCGGT GCGTATCCAT CGCGAGGAAG TGCAGAGCAA GGTGTTCCGC GCGCTGAAGA TCGGCGCGGA AGAAGCGCAA CTGAAGTTCG GCTTCCTGCT GGACGCGCTC CAGTACGGCG CGCCGCCGCA CGGCGGTATC GCGTTCGGTC TCGACCGCAT CGTCACGATG ATGGCCGGTG CCGACTCGAT CCGCGACGTG ATCGCGTTCC CGAAGACGCA GCGTGCGCAG GATCTGCTCA CGCAGGCGCC GAGCCCGGTC GACGAGCGTC AGCTGCGCGA ACTGCACATC CGTCTGCGTC AGCCGGAACA GCCGAAGGCG TAA
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Protein sequence | MSMRTEYCGL VTEHLLGQTV SLCGWVQRRR DHGGVIFIDL RDREGLVQVV CDPDRAEMFA TAEGVRNEFC VQIKGLVRNR PEGTVNAGLK SGKIEVLCHE LNVLNASVTP PFQLDDDNLS ETTRLTHRVL DLRRPQMQHN LRLRYRVAIE ARKYLDEQGF IDIETPMLTK STPEGARDYL VPSRVNAGQF FALPQSPQLF KQLLMVANFD RYYQITKCFR DEDLRADRQP EFTQIDCETS FLGEQEIRDL FEDMIRHIFK TTIDVELDAT FPVMPYSEAM ARFGSDKPDL RVQLEFTELT DAMKDVDFKV FSTPANAKDG RVAALRVPKG GELSRGDIDG YTEFVRIYGA KGLAWIKVNE KAKGRDGLQS PIVKNLHDAS IAAILERTGA EDGDIIFFAA DRAKVVNDSL GALRLKIGHS EFGKANGLVQ AGWKPLWVVD FPMFEYDDED ARYVAAHHPF TSPKDEHLEY LETDPGRCLA KAYDMVLNGW EIGGGSVRIH REEVQSKVFR ALKIGAEEAQ LKFGFLLDAL QYGAPPHGGI AFGLDRIVTM MAGADSIRDV IAFPKTQRAQ DLLTQAPSPV DERQLRELHI RLRQPEQPKA
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