| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_2744 |
|---|
| Symbol | |
|---|
| ID | 4310440 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | - |
|---|
| Start bp | 3021359 |
|---|
| End bp | 3022534 |
|---|
| Gene Length | 1176 bp |
|---|
| Protein Length | 391 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 638150583 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_774634 |
|---|
| Protein GI | 115352795 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00880] Multidrug resistance protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCATCC CGTTACTGGC GCTCGCGATC AGCGCGTTTG CCATCGGCAC TACCGAATTC
ATCATCATGG GGCTCCTGCC CGAAGTCGCG CACGACCTCG CCGTGTCGCT GCCGTCGGCC
GGCCTGCTCG TCACCGGCTA CGCGCTCGGC GTCGCGGTCG GCGCGCCGCT GCTCGCGGTG
CTGACGAGCC GCATGCCGCG CAAGGCCGCA TTGCTGCTGC TGATGGCGAT CTTCATCGTC
GGCAACGTGC TGTGCGCGAG CGCGTCCGGC TACGCGATGC TGATGGTCGC GCGCGTCGTC
ACGTCGTTCG CGCACGGCTC GTTCTTCGGG ATCGGCGCGG TGGTCGCCGC GTCGCTCGTG
CCGGCCGACA AGCGCGCGAG CGCGATCGCG CTGATGTTCA CGGGCCTTAC GCTGTCGAAC
GTGCTCGGCG TGCCGTTCGG CACGTTCGTC GGCCAACTGC TCGGCTGGCG CGCGTCGTTC
TGGATCGTCG CCGCGCTCGG CGTGCTGTCG CTCGGCGGCG TCGCGCTGCT GGTGCCGAAC
CGTCATGACG GCGGCCCCGT CGGCCTCGGC CACGAAGTGC GCGTGCTGAA GGAGCCGCAG
GTCTGGCTCG CGCTGCTGAT GACCGTGCTC GGCTTCGGCG GCGTGTTCGT CGTGTTCACG
TACATCGCGC CGATCCTCGA AACCGTCACC GGCTATTCGC CGCGGGCGGT CGCGCTGATC
CTCGTGCTGT TCGGCGCCGG GCTCACGGTC GGCAACACGC TCGGCGGCAA GCTTGCCGAC
CGCGCGTTGA TGCCGTCGCT GATCGCGATC CTGGTCGCGC TGATGGCGGT GATGGCCGTG
TTCGCGAAGA CGAGCCACCT GCCGGTCGCG GCCGCGGTGA CGGTGTTCGT GTGGGGGATC
GCCGCGTTCG CGACGGTGCC GCCGCTGCAG GCGCGCGTCG TCGAGAAGGC CGCGAGCGCG
CCGCATCTCG CGTCGACGCT GAACATCGGC GCCTTCAACG TCGGCAATGC GGGCGGTGCG
TGGCTCGGCG GACTGGCGCT GGAACACGGC TTCGCGCTCG ATGCGCTGCC GTGGGTCGCC
GTCGCGGTGA CGTTCGCGGC GCTCGTCGTC ACGTGGTTCG CGATGCGGCT CGATGCGCGC
GCGCCGGCGC GCGGCGCGGC GCCGGCCGCG CATTGA
|
|---|
| Protein sequence | MPIPLLALAI SAFAIGTTEF IIMGLLPEVA HDLAVSLPSA GLLVTGYALG VAVGAPLLAV
LTSRMPRKAA LLLLMAIFIV GNVLCASASG YAMLMVARVV TSFAHGSFFG IGAVVAASLV
PADKRASAIA LMFTGLTLSN VLGVPFGTFV GQLLGWRASF WIVAALGVLS LGGVALLVPN
RHDGGPVGLG HEVRVLKEPQ VWLALLMTVL GFGGVFVVFT YIAPILETVT GYSPRAVALI
LVLFGAGLTV GNTLGGKLAD RALMPSLIAI LVALMAVMAV FAKTSHLPVA AAVTVFVWGI
AAFATVPPLQ ARVVEKAASA PHLASTLNIG AFNVGNAGGA WLGGLALEHG FALDALPWVA
VAVTFAALVV TWFAMRLDAR APARGAAPAA H
|
|---|
| |