Gene Bamb_2705 details

Gene Information

• Locus tag: Bamb_2705
• ID: 4310401
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia ambifaria AMMD
• Kingdom: Bacteria
• Replicon accession: NC_008390
• Strand: +
• Start bp: 2980885
• End bp: 2981568
• Gene Length: 684 bp
• Protein Length: 227 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 638150544
• Product: ThiJ/PfpI domain-containing protein
• Protein accession: YP_774595
• Protein GI: 115352756
• COG category: [K] Transcription
• COG ID: [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCCTGC ATATCGGCCT TCTCGTGTTT CCGGGCGTCC AGCAACTCGA TCTCACCGGC 
CCGCACGACG TGCTCGCGTC GCTGCCCGAC GCGGCTGTCC ATCTGGTCTG GAAATCGCGC 
GACACCGTCG CATCGAGCAG CGGCCTCGCG CTCGCGCCGA CCTGCACGTT CGACGACTGC 
CCGCCGCTCG ACGTGATCTG CGTGCCCGGC GGCATCGGCA TCAACGACCT GCTGCTCGAT 
GCGGAAACGA TCGCGTTCGT GCAGCGCCGC GCGGCCACCG CGCGCTATGT GACGTCGGTC 
TGCACGGGCG CGCTGCTGCT CGGCGTGGCC GGCCTGCTGC GCGGACGCCG CGCGACGACG 
CACTGGGCGT TTCACGAACT GCTCGAACCG CTCGGTGCGG TGCCGGTGCG CGAGCGCGTG 
GTGCGCGACG GCAACCTGAT CACCGGCGGC GGCGTGACGG CCGGCATCGA CTTCGCATTG 
ACGATCGCCG CCGAACTCGC GGGCGACGAA GAGGCGCAGT CGATCCAGCT GGCGCTCGAA 
TACGCGCCGG CGCCGCCGTT CGACGCGGGC TCGCCGGATA CCGCGCCCGC GTCGGTGCTG 
AAGCGCGTGA CCGAGCGCTC GGCGGCGGGG CTGGAGAAGC GCAGGCAGAC GATCGACGCG 
GCCTTGCGTG CGATGGCGCG CTGA 

 

Protein sequence

MTLHIGLLVF PGVQQLDLTG PHDVLASLPD AAVHLVWKSR DTVASSSGLA LAPTCTFDDC 
PPLDVICVPG GIGINDLLLD AETIAFVQRR AATARYVTSV CTGALLLGVA GLLRGRRATT 
HWAFHELLEP LGAVPVRERV VRDGNLITGG GVTAGIDFAL TIAAELAGDE EAQSIQLALE 
YAPAPPFDAG SPDTAPASVL KRVTERSAAG LEKRRQTIDA ALRAMAR