| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_2663 |
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| Symbol | |
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| ID | 4310009 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 2932491 |
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| End bp | 2933975 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638150501 |
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| Product | protease Do |
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| Protein accession | YP_774553 |
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| Protein GI | 115352714 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACACTC GATTCCTTGC GCGCGGCGCC GTCGCGGTCG CCGTGGCGGC CGCCCTGTCC
GCCGGCTATG TCGCGGGCAC GCGCCACGCC GATCCGCAGA TCATCACGCC TGCGCAGGCC
GCTGCGCTGA TGCCGGCCGA GGCCGCGGCG AAGACGGGCA TTCCCGATTT CTCCGGGCTC
GTCGAAACCT ACGGCCCGGC GGTCGTCAAC ATCAGCGCGA AACACGTCGT GAAGCAGGTG
TCGCGACGCG TGCAGCAGCC GCAACTGCCG ATGGATCCGA GCGATCCGTT CTACCAGTTT
TTCAAGCATT TCTACGGCCA GGTGCCGGGC ATGGGCGGCG ACGCGCAGCC GGACGACCAG
CCGAGCGCGA GCCTCGGTTC GGGCTTCATC GTCAGCGCCG ACGGGTACAT CCTCACCAAC
GCGCACGTGA TCGACGGCGC GAACGTCGTC ACGGTCAAGC TGACCGACAA GCGCGAGTAC
AAGGCGAAGG TCGTCGGCTC CGACAAGCAG TCCGACGTCG CGGTGCTGAA GATCGACGCG
AGCGGCCTGC CGACCGTGAA GATCGGCGAC CCGGGCCAGA GCAAGGTCGG CCAGTGGGTC
GTCGCGATCG GCTCGCCGTA CGGCTTCGAC AACACGGTCA CGTCCGGCAT CATCAGCGCG
AAATCGCGCG CGCTGCCCGA CGAGAACTAC ACGCCGTTCA TCCAGACCGA CGTGCCGGTG
AACCCCGGCA ACTCGGGCGG CCCGCTGTTC AACCTGCAGG GCGAGGTAAT CGGCATCAAC
TCGATGATCT ACTCGCAGAC GGGCGGCTTC CAGGGCCTGT CGTTCGCGAT CCCGATCAAC
GAGGCGATCA AGGTCAAGGA CGAGCTCGTG AAGACGGGCC ACGTGAGCCG CGGCCGCCTC
GGCGTCGCGG TGCAGGGGCT GAACCAGACG CTCGCGAGCT CGTTCGGACT GCAGAAGCCG
GACGGCGCGC TCGTCAGCTC GGTCGACCCG AACGGCCCGG CCGCGAAGGC CGGCCTGCAG
CCGGGCGACG TGATCCTCGG GGTGAACGGT TCGCCGGTGG CCGACTCCAC GTCGCTGCCC
GCGCAGATCG CGAACCTGAA GCCGGGCTCG AAGGCCGACC TGCAGGTGTG GCGCGACAAG
TCGAAGAAGA CGATCAGCGT GACGCTCGGC GCGATGACCG ACGCGAAGCT GGCGTCGAAC
GACGGCGGCC CGGTCGAGCA GGGGCGCCTC GGCGTCGCGG TGCGGCCGCT CACGCCGCAG
GAGCGCAGCG CCACCAACCT GTCGCACGGG CTGATCGTGC AGCAGGCAGG CGGGCCGGCC
GCGACCGCGG GCATCCAGCC CGGCGACGTG ATCCTCGCGG TCAACGGCCG CCCGGTCACG
AGCGCCGAGC AATTGCGCGA GGCGGTCAAG GGAGCGGGCA ACAGTCTTGC TCTCCTGATT
CAGCGCGATA ATGCACAGAT CTTCGTGCCG GTCGACCTGA GCTGA
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| Protein sequence | MNTRFLARGA VAVAVAAALS AGYVAGTRHA DPQIITPAQA AALMPAEAAA KTGIPDFSGL
VETYGPAVVN ISAKHVVKQV SRRVQQPQLP MDPSDPFYQF FKHFYGQVPG MGGDAQPDDQ
PSASLGSGFI VSADGYILTN AHVIDGANVV TVKLTDKREY KAKVVGSDKQ SDVAVLKIDA
SGLPTVKIGD PGQSKVGQWV VAIGSPYGFD NTVTSGIISA KSRALPDENY TPFIQTDVPV
NPGNSGGPLF NLQGEVIGIN SMIYSQTGGF QGLSFAIPIN EAIKVKDELV KTGHVSRGRL
GVAVQGLNQT LASSFGLQKP DGALVSSVDP NGPAAKAGLQ PGDVILGVNG SPVADSTSLP
AQIANLKPGS KADLQVWRDK SKKTISVTLG AMTDAKLASN DGGPVEQGRL GVAVRPLTPQ
ERSATNLSHG LIVQQAGGPA ATAGIQPGDV ILAVNGRPVT SAEQLREAVK GAGNSLALLI
QRDNAQIFVP VDLS
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