Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_2654 |
Symbol | |
ID | 4310000 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | - |
Start bp | 2921653 |
End bp | 2923176 |
Gene Length | 1524 bp |
Protein Length | 507 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638150492 |
Product | RND efflux system outer membrane lipoprotein |
Protein accession | YP_774544 |
Protein GI | 115352705 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0354944 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGCAAA AACACGCTTT GACTGCAATC GCGGTCGCGC TCCTTGCCAC GGGCTGCACG ATGGCGCCGC ATTACAAGCG GCCCGACGCA CCCGTCGCGC AGGCGTACCC GGCCGACGGC GTCTATGCGA CGCAGCCGGG TGCTGCCGGC GCGCGCAGCG CCAACGGCCA GGCGGCGACC GCCATCGGCT GGCGCGAATT CTTCGTCGAT CCGCGCCTGC AGCGGCTGAT CGAGATCGCG CTGAAGAACA ACCGCGACCT GCGCGTCGCG GTGCTGAACA TCGAGGCGGC CCGCGCGCAG TACCAGATCA CGCGCGCCGG CCTGTTCCCG ACGCTCGACG GCACGGGCAC CGGCACTATC CAGCGCGTGC CGCAGGGCCT TTCGCAGACC GGTGCGCCGT ACATCTCGCG CGCCTACAAC GTCGGCCTGT CCGCGTCGTG GGAGCTCGAC CTGTTCGGCC GCGTGCAGAG CCTGAAGGAC CAGGCGCTCG CGCAGTACCT GTCGACGTCG TATGCACGGC AGGCCACCGA GATCTCGCTG GTGTCGCAGG TCGCGGATCA GTACCTGACG CTGCTGTCGA CCGACGATCT GCTGAAGGTC ACGGAAAACA CGCTGAAGAC CGCGCAGGCG TCGTACGACC TGACCAAGCT GCAGTTCGAC AACGGCACGG GCTCCGAGCT CGAGCTGCGT CAGGCGCAGA CGGTGGTCGA GCAGGCGCTG TCGAACCAGC AGGCGCAGGC GCGCGCGCGT GCGCAGGCAT TGAATGCGCT GGTGCTGCTG ATCGGCGAGC CGCTGCCGGA CGATCTGCCG GCGGGCATGC CGCTCGACGC GCAGAACCTG CTGACGGACG TGCCGGCCGG CCTGCCGTCG GACCTGCTGA CGCGTCGCCC CGACGTGATG CAGGCCGAGC AGACGCTGCT GGCCGCGAAC GCGAACATCG GCGCGGCACG CGCGGCATTC TTCCCGCGCA TCTCGCTGAC GGGCGCGTTC GGCACCGGAA GCCCGACGCT CGGTGGGCTG TTCAAGGCCG GCACGGCGGC GTGGTCGTTC GCGCCGCAGA TCACGATGCC GATCTTCGAA GGCGGGCAGA ACATCGCGAA CCTGAACCTC GCGAACGTGC AGAAGCGCAT CGAGATCGCC AACTACGAGA AGGCGATCCA GTCGGCGTTC CGCGAAGTGT CCGACGGGCT GGCGGCACGC GGCACGTACG ACCAGCAGAT CGCCGCGCTC CAGCGCAACG AGCACGCGCA GCAGCGTCGT TTCGATCTGT CGGACCTGCG CTACAAGAAC GGGGTCGACA GCTACCTGTC GGTGCTGACC GCGCAAACCG ACCTGTACAC CGCGCAGCAG ACGCTGATCA ACGCGCGTCT GGCCCGCTGG ACGAACCTGG TCGACCTGTA CCGCGCACTG GGCGGCGGAT GGATCCAGCA AGCCGGCGAG ACGCCGCGCG CGCCGGACCA GACGGTCGAC TACGACAAGG CGGCCGCACC GGCGCCTGCG TCGGCGGCGG CGACGAACGG GTAA
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Protein sequence | MMQKHALTAI AVALLATGCT MAPHYKRPDA PVAQAYPADG VYATQPGAAG ARSANGQAAT AIGWREFFVD PRLQRLIEIA LKNNRDLRVA VLNIEAARAQ YQITRAGLFP TLDGTGTGTI QRVPQGLSQT GAPYISRAYN VGLSASWELD LFGRVQSLKD QALAQYLSTS YARQATEISL VSQVADQYLT LLSTDDLLKV TENTLKTAQA SYDLTKLQFD NGTGSELELR QAQTVVEQAL SNQQAQARAR AQALNALVLL IGEPLPDDLP AGMPLDAQNL LTDVPAGLPS DLLTRRPDVM QAEQTLLAAN ANIGAARAAF FPRISLTGAF GTGSPTLGGL FKAGTAAWSF APQITMPIFE GGQNIANLNL ANVQKRIEIA NYEKAIQSAF REVSDGLAAR GTYDQQIAAL QRNEHAQQRR FDLSDLRYKN GVDSYLSVLT AQTDLYTAQQ TLINARLARW TNLVDLYRAL GGGWIQQAGE TPRAPDQTVD YDKAAAPAPA SAAATNG
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