| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_2653 |
|---|
| Symbol | |
|---|
| ID | 4309999 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | + |
|---|
| Start bp | 2920030 |
|---|
| End bp | 2921406 |
|---|
| Gene Length | 1377 bp |
|---|
| Protein Length | 458 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 638150491 |
|---|
| Product | uracil-xanthine permease |
|---|
| Protein accession | YP_774543 |
|---|
| Protein GI | 115352704 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG2233] Xanthine/uracil permeases |
|---|
| TIGRFAM ID | [TIGR00801] uracil-xanthine permease
[TIGR03173] xanthine permease |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.139978 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAATCGA ACACGGTCCA TCCGTGCGAT GAGGTGCTGC CGACCGGCAA GCTTGTAACG
CTTGGTCTGC AGCACGTCCT CGTCATGTAC GCCGGCGCCG TCGCCGTGCC GCTTATCGTC
GGCGGCGCGC TGAAGCTGCC GAAAGACCAG ATCGCGTTCC TGATCAGCGC CGATCTGTTT
TCGTGCGGCA TCGCCACGCT GATCCAGACG CTCGGCCTGT GGATCTTCGG AATCCGCCTG
CCCGTCATCA TGGGCTGCAC GTTCGCCGCG GTCGGCCCGA TGATCGCGAT CGGGACCAAC
CCCGGCCTCG GCATTCTCGA CATCTTCGGC TCGACCATCG CGGCCGGCAT CATCGGCATC
GTGCTCGCGC CGATGATCGG CAAGCTGCTG CGGTTCTTCC CGCCGGTAGT GGTCGGCACC
GTGATCGCGG TGATCGGGCT GTCGCTGATG GAAGTCGGGA TCAACTGGGC GGCCGGCGGC
GTCGGCAATC CCGAATACGG CAGCCCCGTC TACCTCGGCC TGTCGCTGCT CGTGCTCACG
CTGATCCTGC TGATCAACAA GTTCGGCCGC GGCTTCCTCG CGAACATCTC GGTGCTGCTC
GGCATCGTCG CCGGCTTCGT GATCGCGTTT GCGGTCGGCC GCGTGAATAC CGACGGCGTG
GCGCTCGCGC CGTGGGTCGG CTTCGTGATG CCGTTCCACT TCGGCATGCC GCATTTCGAC
CCGCTGTCGA TCGCGACGAT GGTGACGGTG ATGTTCGTCA CGTTCATCGA ATCGACCGGC
ATGTTCCTCG CGGTCGGCGA CATGGTCGAT CGTCCGGTCA ACCAGGACCG TCTCGTGCGC
GGCCTGCGCG TCGACGGCCT CGGCACGCTG ATCGGCGGCA TCTTCAACTC GTTCCCGCAC
ACGTCGTTCT CGCAGAACGT CGGCCTGATC GGCGTGACGG GCGTGAAGAG CCGGTACGTC
TGCGCGACGG GCGGCGTGAT CCTGGTGCTG CTCGGCCTGT TCCCGAAGAT GGCGCAGGTT
GTCGCGTCGG TGCCGCCGTT CGTGCTCGGC GGCGCGGGCA TCGTGATGTT CGGGATGGTG
GCGGCCAACG GCATCAAGGT GCTGTCGAAG GTCGACTTCG TGAACAACAC GCACAACCTG
TTCATCGTCG CGGTGAGCGT CGGCATGGGC CTCGTGCCGG TCGTGTCGCC GCACTTCTTC
TCGAAGCTGC CGCCCGCGCT CGCACCGATC CTGCACAGCG GCATCCTGCT CGCGTCGGCC
TCCGCCGTGA TCCTGAACAT CGTGTTCAAC GGCGTGAAGG GCGAGAAGGA TGCGCGTTGC
GAGATCCGTC GCGCAGGACA TGACTTCGAC GGGCGCCCGG CCGACGTGCA TCACTGA
|
|---|
| Protein sequence | MQSNTVHPCD EVLPTGKLVT LGLQHVLVMY AGAVAVPLIV GGALKLPKDQ IAFLISADLF
SCGIATLIQT LGLWIFGIRL PVIMGCTFAA VGPMIAIGTN PGLGILDIFG STIAAGIIGI
VLAPMIGKLL RFFPPVVVGT VIAVIGLSLM EVGINWAAGG VGNPEYGSPV YLGLSLLVLT
LILLINKFGR GFLANISVLL GIVAGFVIAF AVGRVNTDGV ALAPWVGFVM PFHFGMPHFD
PLSIATMVTV MFVTFIESTG MFLAVGDMVD RPVNQDRLVR GLRVDGLGTL IGGIFNSFPH
TSFSQNVGLI GVTGVKSRYV CATGGVILVL LGLFPKMAQV VASVPPFVLG GAGIVMFGMV
AANGIKVLSK VDFVNNTHNL FIVAVSVGMG LVPVVSPHFF SKLPPALAPI LHSGILLASA
SAVILNIVFN GVKGEKDARC EIRRAGHDFD GRPADVHH
|
|---|
| |