Gene Bamb_2625 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_2625 
Symbol 
ID4311350 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand+ 
Start bp2887750 
End bp2888391 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content72% 
IMG OID638150463 
Productcyclase family protein 
Protein accessionYP_774515 
Protein GI115352676 
COG category[R] General function prediction only 
COG ID[COG1878] Predicted metal-dependent hydrolase 
TIGRFAM ID[TIGR03035] arylformamidase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.452605 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACACAC TCTGGGACAT CTCGCCGCCC GTCAGCCCCG CCACCCCCGT GTGGCCGGGC 
GATACGCCCG TTTCCGTCGA ACGCGTGTGG CGGATGGAGG CCGGCTCGCC GGTCAACGTC 
GCGCGGCTGA CGCTGTCGCC GCATACGGGC GCGCACTGCG ACGCGCCGCT CCACTATGAC 
GCCGACGGCG CGCCGATCGG CGCGGTGCCG CTCGATACCT ATCTCGGCCC GTGCCGCGTG 
ATCCACTGCA TCGGCGCAGC GCCGGTCGTG CGCCCGGCCG ACATCGAGGC CGCGCTCGAC 
GGCGTGCCGC CGCGCGTGCT GCTGCGCACC TATGCACGCG CCAGCGTCGA GCAATGGGAC 
AGCGGCTTCT GCGCGGTCGC GCCCGAGACC GTCGACCTGC TCGCCGCGCA CGGCGTGAAG 
CTGATCGGCA TCGACACGCC GTCGCTCGAC CCGCAGGAAT CGAAGACCAT GGATGCGCAT 
CATCGCGTGC GCGCACACCG GATGGCGATC CTCGAAGGGA TCGTGCTCGA CGACGTGCCG 
CCCGGCGACT ACGAGCTGAT CGCGCTGCCG CTGAAGTTCG CGACGCTCGA CGCAAGCCCC 
GTGCGTGCGG TGCTGCGCGC GCTGCCCGGC CACTCCTCCT GA
 
Protein sequence
MDTLWDISPP VSPATPVWPG DTPVSVERVW RMEAGSPVNV ARLTLSPHTG AHCDAPLHYD 
ADGAPIGAVP LDTYLGPCRV IHCIGAAPVV RPADIEAALD GVPPRVLLRT YARASVEQWD 
SGFCAVAPET VDLLAAHGVK LIGIDTPSLD PQESKTMDAH HRVRAHRMAI LEGIVLDDVP 
PGDYELIALP LKFATLDASP VRAVLRALPG HSS