Gene Bamb_2562 details

Gene Information

• Locus tag: Bamb_2562
• Symbol: dut
• ID: 4308897
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia ambifaria AMMD
• Kingdom: Bacteria
• Replicon accession: NC_008390
• Strand: +
• Start bp: 2820945
• End bp: 2821391
• Gene Length: 447 bp
• Protein Length: 148 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 638150400
• Product: deoxyuridine 5'-triphosphate nucleotidohydrolase
• Protein accession: YP_774452
• Protein GI: 115352613
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0756] dUTPase
• TIGRFAM ID: [TIGR00576] deoxyuridine 5'-triphosphate nucleotidohydrolase (dut)

Plasmid Coverage information

• Num covering plasmid clones: 30
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAACTCG ACCTGAAGAT TCTCGACGCG CGCATGCGCG ACTACATGCC CGCCTACGCC 
ACCACCGGCA GCGCGGGCCT CGACCTGCGC GCGTGCCTCG ACGCACCCGT CACGCTGCAG 
CCGGGCGAAA CGACGCTGGT GCCGACGGGC CTCGCGATTC ATCTCGCGGA TCCCGGCTAT 
GCGGCGCTGA TCCTGCCGCG CTCGGGCCTC GGCCACAAGC ACGGGATCGT GCTCGGCAAC 
CTCGTCGGCC TGATCGATTC CGACTACCAG GGCCAGCTGA TGGTGTCGAC GTGGAACCGC 
GGCCAGACCG AATTCGTGCT GAACCCGTTC GAGCGGCTCG CGCAACTCGT GATCGTGCCG 
GTCGTGCAGG CGCAGTTCAA CATCGTCGAC GATTTCGCGC AAAGCGATCG CGGCGAAGGC 
GGCTTCGGCA GCACCGGACG TCACTGA 

 

Protein sequence

MKLDLKILDA RMRDYMPAYA TTGSAGLDLR ACLDAPVTLQ PGETTLVPTG LAIHLADPGY 
AALILPRSGL GHKHGIVLGN LVGLIDSDYQ GQLMVSTWNR GQTEFVLNPF ERLAQLVIVP 
VVQAQFNIVD DFAQSDRGEG GFGSTGRH