Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_2556 |
Symbol | |
ID | 4308891 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | - |
Start bp | 2813130 |
End bp | 2814392 |
Gene Length | 1263 bp |
Protein Length | 420 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 638150394 |
Product | Fmu (Sun) domain-containing protein |
Protein accession | YP_774446 |
Protein GI | 115352607 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.471824 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGCTGC ACGGATTCCT GATTGGCCAG ACCGAGACCT TGCTGGCGGA GGTGCTGAAG TTCACCGGCC CCGCCGACGC GACGACGAGC CGGTTCTTCC GCGCGCACCC GAAGCTCGGC CACGCCGAGC GCGGCGTGAT CGCCGAGGCG GTGTTCGCGG TGCTGCGCCG GAAGATGGAG TTTTCGCACC TCGCCGAGAG CGGCACGGGC AGCCCCGCAC GGCGCCTCAC GCTGCTGGGC CTGATGCAGA CGCTCGGCCG CAATGCGCTG AAGCCGTTCG TGTCCGACAC CGAGGCCGCA TGGCTCGAGC ACGTGTCGAA GATCGACCCG GCGAGCCTGC CGGTGCGCGT GCGCACGAAC CTGCCGGACT GGATCTACCA GGCGCTGTCG GCCCGTTTCG ACGCCGAGGA GCTCGCGCAG CTCGCCGCCG CGCTGAATTA CCCGGCGCCG CTCGACCTGC GCGCCAACGC GCAGAAGGCG ACGCGCGACC AGGTGATCGA CGCGCTGCGC GCGGAGGGCA TCGACGCGGG CGAGACGCCG TTCGCGCCGC AGGGCGTGCG CGTCGTCGGC AAGCCGGCGC TCACGCGCCT GCAGGTGTTC CAGGAAGGGC AGATCGAGGT GCAGGACGAG GGCAGCCAGC TGCTGTGCTC GCTGGTCGCG CCGCGCCGCG GCGAGATGAT CGTCGATTTC TGCGCGGGCG CCGGCGGCAA GACGCTCGCG CTCGGCGCGA TGATGCGCTC GACCGGGCGC CTTTACGCGT TCGACGTGTC GGAAAAGCGC CTGACCAAGC TCAAGCCGCG CCTCGCGCGC AGCGGGCTGT CGAACGTGAA CCCGGTGCTG ATCGACAGCG AGCACGATGC GAAGATCAAG CGGCTCGCCG GCAAGATCGA CCGCGTGCTG GTCGACGCGC CGTGCAGCGG CCTCGGCACG CTGCGCCGCA ATCCCGACCT GAAGTGGCGC CAGACGCGCA CGTCGATCGA GGAACTCACG CCGAAGCAGG CGTCGATCCT CGCGAGCGCC GCGCGTCTCG TGAAGAAGGG CGGCCGGCTC GTGTACGCGA CCTGCAGCGT GCTCCACGCG GAGAACGAAG CGATCGTCGA GCAGTTCCTG GCCGACCATC CGGAGTTCGT GCTGGTGCCC GCGCAGCAGG TGCTGGCCGA CCAGCGCATC GCGATCGAGA CCGGCGACTA CCTGTCGCTG TGGCCGCACC GCCACGCGAC CGACGGCTTC TTCGCCGCGG TGCTCGAGCG GCGCGCGCAG TAA
|
Protein sequence | MKLHGFLIGQ TETLLAEVLK FTGPADATTS RFFRAHPKLG HAERGVIAEA VFAVLRRKME FSHLAESGTG SPARRLTLLG LMQTLGRNAL KPFVSDTEAA WLEHVSKIDP ASLPVRVRTN LPDWIYQALS ARFDAEELAQ LAAALNYPAP LDLRANAQKA TRDQVIDALR AEGIDAGETP FAPQGVRVVG KPALTRLQVF QEGQIEVQDE GSQLLCSLVA PRRGEMIVDF CAGAGGKTLA LGAMMRSTGR LYAFDVSEKR LTKLKPRLAR SGLSNVNPVL IDSEHDAKIK RLAGKIDRVL VDAPCSGLGT LRRNPDLKWR QTRTSIEELT PKQASILASA ARLVKKGGRL VYATCSVLHA ENEAIVEQFL ADHPEFVLVP AQQVLADQRI AIETGDYLSL WPHRHATDGF FAAVLERRAQ
|
| |