Gene Bamb_2529 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_2529 
Symbol 
ID4310155 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp2786888 
End bp2787787 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content71% 
IMG OID638150367 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_774419 
Protein GI115352580 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGAAG TCATTCTCGT CACCGGCGCG TCCAGCGGCT TCGGCCTGCT GACGGCCCAG 
GCGCTCGCCC GCGCCGGCCA TACGGTCTAT GCGTCGATGC GCGAGAGCGC CGGGCGCAAT
GCGCCGCGCG TCGCCGCCAT CGCCGACTAC GCACGCGAGC ACGGCGTCGA CCTGCGCACC
GTCGAACTCG ACGTCGGCGA CGACGCATCC GTCGCCGCCG CGATCGAGCG CGTGATCGCG
GACAACGGCC GCCTCGACAT CGTCGTCCAC AATGCCGGCC ACATGGTGTT CGGCCCGGCG
GAAGCGTTCA CGCCCGATCA GCTGGCGCGG CTCTACGACA TCAACGTCGT GTCCACGCAG
CGCGTGAACC GGGCCGTGCT GCCGCACCTG CGCAGCCGGG GCCGCGGCCT GCTCGTGTGG
GTGTCGTCCT CGTCGGCGCG CGGCGGCACG CCGCCGTTCC TCGCACCCTA CTTCGCCGCG
AAGGCCGCGA TGGATTCGCT CGCGGTGTCC TATGCGGCCG AGCTCGCGCG CTGGGGCATC
GAAACATCGA TCGTCGTACC GGGCGCGTTC ACCCACGGCA CGAATCACTT CGCCCACGCG
GGCAAGCCGG CCGATGCGGC GGTGCAGGCC GCGTACGACG ACGGCCCCTA CGCGAGGGTC
GCCGAGCAGG CGTTGCAAGG CCTCACCGCA CTCGAGCCCG CGGACGCCGA TGCCGCCACC
GTCGCGACGG CGATCGTCGA CATCGTCGCC GCGCCGTCAG GCAAGCGCCC GTACCGCGTA
TTCGTCGATC CGTCGCAGGA CGGCGCGGAG GAAGTGTTCC GTATTGGCGA TCGCATTCGC
CGCGAGATGT TCCGCAACAT CGGACTCGCC GACCTGCTCG CGCCCCGCGT CGGCAACTGA
 
Protein sequence
MKEVILVTGA SSGFGLLTAQ ALARAGHTVY ASMRESAGRN APRVAAIADY AREHGVDLRT 
VELDVGDDAS VAAAIERVIA DNGRLDIVVH NAGHMVFGPA EAFTPDQLAR LYDINVVSTQ
RVNRAVLPHL RSRGRGLLVW VSSSSARGGT PPFLAPYFAA KAAMDSLAVS YAAELARWGI
ETSIVVPGAF THGTNHFAHA GKPADAAVQA AYDDGPYARV AEQALQGLTA LEPADADAAT
VATAIVDIVA APSGKRPYRV FVDPSQDGAE EVFRIGDRIR REMFRNIGLA DLLAPRVGN