| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_2476 |
|---|
| Symbol | |
|---|
| ID | 4308863 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | + |
|---|
| Start bp | 2730541 |
|---|
| End bp | 2732013 |
|---|
| Gene Length | 1473 bp |
|---|
| Protein Length | 490 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 638150313 |
|---|
| Product | argininosuccinate lyase |
|---|
| Protein accession | YP_774366 |
|---|
| Protein GI | 115352527 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0165] Argininosuccinate lyase |
|---|
| TIGRFAM ID | [TIGR00838] argininosuccinate lyase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTAGAAT TGCAGGATTC CCTCGGCGGC GCACGCCGCC CAACTCCCCT TCGAAGAATC
GCCATGACGT CCCAACTGCA CAAAAAGGGC GAGGCCTGGT CGGCCCGCTT CTCGGAACCG
ATGTCGGAGC TGGTCAAGCG CTACACGTCG TCGGTGTTTT TCGACAAGCG CCTCGCGCTC
GTCGACATCG CCGGCTCGCT CGCGCACGCG AGCATGCTCG CGGCGCAGAA GATCATCAGC
ACCGACGACC TCGCCGCGAT CGAACGCGGG ATGACGCAGA TCAAGGGCGA GATCGAGCGC
GGCGAATTCG AATGGCAGCT GGATCTCGAG GACGTCCACC TGAACATCGA GGCGCGCCTG
ACCGCGCTGA TCGGCGATGC GGGCAAGCGT CTGCACACGG GCCGCTCGCG CAACGACCAG
GTCGCGACCG ACATCCGTCT GTGGCTGCGC GGCGAGATCG ACCGCATCGG CGGCCTGCTG
AACGACCTGC GCGGCGCGCT GATCGACCTC GCGGAGAAGA ACGCCGACAC GATCATGCCG
GGCTTCACGC ACCTGCAGGT CGCGCAGCCG GTCACGTTCG GCCATCACCT GCTCGCGTAC
GTCGAGATGT TCACGCGCGA CGCGGAACGC ATGCGCGACT GCCGCACCCG CGTGAACCGC
CTGCCGCTCG GCGCGGCCGC GCTCGCGGGC ACCAGCTACC CGATCGACCG TCACGCCGTC
GCGAAGACGC TCGGCTTCGA CGGCATCTGC GCGAACTCGC TCGACGCGGT GTCGGATCGC
GACTTCGCGA TCGAATTCGC GGCGGCATCC GCGCTCGTGA TGACGCACGT GTCGCGCTTC
TCCGAGGAAC TCGTGCTGTG GATGAGCCCG CGCGTCGGCT TCATCGACAT CGCCGATCGC
TTCTGCACCG GCAGCTCGAT CATGCCGCAG AAGAAGAACC CGGACGTGCC CGAGCTCGCG
CGCGGCAAGA CGGGCCGCGT GAACGGCCAC CTGATGGCGC TCCTCACGCT GATGAAGGGC
CAGCCGCTCG CGTACAACAA GGACAACCAG GAAGACAAGG AACCGCTGTT CGACACGGTC
GACACCGTCG CCGACACGCT GCGGATCTTC GCCGAGATGG TCGCGGGCAT CACCGTGAAG
CCGGACGCGA TGCGCGCGGC CGCGCTGCAG GGCTTCTCGA CCGCCACCGA CCTCGCCGAC
TACCTCGTGA AGCGCGGGCT GCCGTTCCGC GACGCGCACG AAGCGGTCGC GCACGCGGTG
CGGATCTGCG ACGACCGCGG GATCGACCTC GCCGACCTGA CGCTCGACGA AATGAAGCAG
GAGCTGCCGA ACGTCGCGCA CCTGATCGGC GACGACGTGT TCGGCTACCT GACGCTCGAA
GGTTCGGTCG CAAGCCGCAA CCACGCGGGC GGCACCGCGC CCGACCAGGT GCGTGCGGCG
GTCAAGGCTG CCCGCGCCGC GCTCGGCACG TAA
|
|---|
| Protein sequence | MLELQDSLGG ARRPTPLRRI AMTSQLHKKG EAWSARFSEP MSELVKRYTS SVFFDKRLAL
VDIAGSLAHA SMLAAQKIIS TDDLAAIERG MTQIKGEIER GEFEWQLDLE DVHLNIEARL
TALIGDAGKR LHTGRSRNDQ VATDIRLWLR GEIDRIGGLL NDLRGALIDL AEKNADTIMP
GFTHLQVAQP VTFGHHLLAY VEMFTRDAER MRDCRTRVNR LPLGAAALAG TSYPIDRHAV
AKTLGFDGIC ANSLDAVSDR DFAIEFAAAS ALVMTHVSRF SEELVLWMSP RVGFIDIADR
FCTGSSIMPQ KKNPDVPELA RGKTGRVNGH LMALLTLMKG QPLAYNKDNQ EDKEPLFDTV
DTVADTLRIF AEMVAGITVK PDAMRAAALQ GFSTATDLAD YLVKRGLPFR DAHEAVAHAV
RICDDRGIDL ADLTLDEMKQ ELPNVAHLIG DDVFGYLTLE GSVASRNHAG GTAPDQVRAA
VKAARAALGT
|
|---|
| |