| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_2475 |
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| Symbol | |
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| ID | 4308862 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 2728258 |
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| End bp | 2730504 |
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| Gene Length | 2247 bp |
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| Protein Length | 748 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 638150312 |
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| Product | fimbrial biogenesis outer membrane usher protein |
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| Protein accession | YP_774365 |
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| Protein GI | 115352526 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3188] P pilus assembly protein, porin PapC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCACGC CCACGCCCGC GCCCGCCTCC GACGCACTGT TTCTCGACGT CTCGCTCAAT
GGCGAACCGA CGCACCGGAT CGCACGCTTC CAGCAAATCG ACGGACGCCT GTACGCGGCC
TCCGCCGACC TGAACGACCT GGGTATCGCG ACGAACGACC GGACGAACGA CCGCACGCAG
GAGCCGTCGA ACGTGCTCGT CGCGCTCGAC ACGCTCGCCG GGCTGCGCTA CGACTACGAC
GCGGGCCGGC AGACGCTCGA CCTGCGCGTG CCCGATGCGC TGCGCATCCC GCACACGTTC
GATACGCGCG CCCTCGCGGC CGCGCCGCCC GCCACGTCCG GCCGCGGCTT CGTGCTGAAC
TACGACGCCT ACGCGCAGAC CATCGCCCAT GCGCCGCTCG CGGTCTGGAG CGAGGCGCGC
TATTTCGACC CGTACGGCGT ATTCAGCAGC ACCGGCGTCG CGTATCTGTA CGACGACCGC
CGGCGCTACG TGCGCTACGA CACGTCGTGG AGTCATTCGA ACCCCGGCAC GCTCACGACG
ACCCAGATCG GCGACACGAT TTCGTCGTCG TTGTCGTGGA CCCGCTCGCT GCGCATCGGC
GGCGTGCAGT GGCGCAGCAA TTTCGGCCTG CGTCCCGATC TGGTCACGTT TCCGGTACCC
GCGCTGTCCG GCAGCGCGGT CGTGCCGACC TCGGTCGACC TGTACGTGAA CAACGTGCGC
CAGTTCAGCG GCAACGTGGC GAGCGGGCCG TTCGTGATCA ACAGCGTGCC CGGCATCACC
GGCGCGGGCA ACGCAACGGT CATCACGCGC GACGCGCTCG GCCGCTCGAT CGCGACGTCC
ATTCCGCTGT ACGTCGACAC GCGCCTGCTC GCCCCCGGCC TCGCCAGCTA TTCGGCGGAA
GCCGGGTTCC TGCGCCGCGC CTATGGCATC GATTCCTTCG ACTACGCGCG CACGCCGGCC
GCGAGCGGCT CGCTGCGCTA CGGCATCAGC GAGCGCCTGA CCGTCGAGGC GCATGCGGAA
GCGACGGCCG GCGTCTACAA CGCAGGCGCC GGCGCGCTTG CACGTCTGGG CGAACGCGGC
GTGGCGAACG CGTCGCTGGC GCTCAGCGCG CCGGGCCGCA CCGGCGTGCA GGCCGGCATC
GGCTACCAGT ACGTGACGCC GCGCTTCTCC ATCGATGCGC AGACGCTGCG CGCCTTCGGC
GACTACAGCG ACCTCGGCAG CCGCGAAGGC GTGCCGGTAT CGCGCGCCAC CGACCGCGTC
ACGGTGTCAT TCCCGTTCCT GCGCAGGCAG ACGCTGTCGT TCAGCTATCT CGGCCTCAAG
TATCCGGGCG TCGCCGCCTC GCGCATCGGC TCGGTCGCCT ACCTGGTCAA TCTCGGCGGG
CTGACCTCGA TCACGTTCAG CGGCTTCCAG GACCTCCGGC AGCGCGACAC GCGCGGCTTC
TTCGTGAGCC TGAGCATCGG GCTCGGCGGC AACACGTCCG TGTCGTTGAA CGCCGGGCGG
CAGAACGGCG ACTCGACCTA CACGCTGAGC GCGACACGGC CGCCCGACTA TGGCGGCGGC
GTCGGCTGGA ACGTGCAGGC GGGCGCCAAC GCAGGCATGC GCTACGCGCA GGGGCAGCTG
CAGTATCTCG GCCGTGCGGG CGAGGTCACG CTGCTCGCGC AGTCGTTCGA CGGGCACCGC
AACGCGTCGG TCGACGTCAC GGGCGCGATC GTGCTGATGA ACGGCCAGCT GATGACGGCA
CGCCGCGTCG ACGACGGCTT CGCGCTCGTC TCGACCGACA CCGGGCGCGT GCCCGTGCTG
CACCAGAACC GGATGATCGG CGAGACGGAC CGGGCCGGCT ACCTGCTCGT ACCAGACCTA
AATGCGTACC AGAGCAATCG CGTCGCGATC GACGGCACCG CGCTGCCCGC CGACGCCCGG
ATCGCCGACA CGACGCTCGA TGTCGTGCCG CAGGCGCGCT CCGGCGTGCT CGCGCACTTC
GCCGTGACAC GCTACAGCGC CGCGTCGATC GCGCTGCGCG CGCCGGACGG CACGCCGCTG
CCGCCCGGGC TCGAGGTGCG CCACGTCGAA ACCGGCCAGC GCACGATCGT CGGCTACGAC
GGCCTGACCT TCGTCGACGG CCTCGTCGCG AACAACCACC TGGAAATCAC CGGCGGCGGC
CGCGATTGCG CGGTCGCGTT CGCGTACCAG CGCCCCGACG ACGGCACGCT GCCGCGGATC
GGCCCGCTGA CCTGCGGCCC GCGGTGA
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| Protein sequence | MPTPTPAPAS DALFLDVSLN GEPTHRIARF QQIDGRLYAA SADLNDLGIA TNDRTNDRTQ
EPSNVLVALD TLAGLRYDYD AGRQTLDLRV PDALRIPHTF DTRALAAAPP ATSGRGFVLN
YDAYAQTIAH APLAVWSEAR YFDPYGVFSS TGVAYLYDDR RRYVRYDTSW SHSNPGTLTT
TQIGDTISSS LSWTRSLRIG GVQWRSNFGL RPDLVTFPVP ALSGSAVVPT SVDLYVNNVR
QFSGNVASGP FVINSVPGIT GAGNATVITR DALGRSIATS IPLYVDTRLL APGLASYSAE
AGFLRRAYGI DSFDYARTPA ASGSLRYGIS ERLTVEAHAE ATAGVYNAGA GALARLGERG
VANASLALSA PGRTGVQAGI GYQYVTPRFS IDAQTLRAFG DYSDLGSREG VPVSRATDRV
TVSFPFLRRQ TLSFSYLGLK YPGVAASRIG SVAYLVNLGG LTSITFSGFQ DLRQRDTRGF
FVSLSIGLGG NTSVSLNAGR QNGDSTYTLS ATRPPDYGGG VGWNVQAGAN AGMRYAQGQL
QYLGRAGEVT LLAQSFDGHR NASVDVTGAI VLMNGQLMTA RRVDDGFALV STDTGRVPVL
HQNRMIGETD RAGYLLVPDL NAYQSNRVAI DGTALPADAR IADTTLDVVP QARSGVLAHF
AVTRYSAASI ALRAPDGTPL PPGLEVRHVE TGQRTIVGYD GLTFVDGLVA NNHLEITGGG
RDCAVAFAYQ RPDDGTLPRI GPLTCGPR
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