| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_2406 |
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| Symbol | |
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| ID | 4309526 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 2653394 |
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| End bp | 2655787 |
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| Gene Length | 2394 bp |
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| Protein Length | 797 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638150241 |
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| Product | TOPRIM domain-containing protein |
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| Protein accession | YP_774296 |
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| Protein GI | 115352457 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4643] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.348772 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGTTA ATGTAGAACA AGAACGCATG CGCGCGGCAC TGAGCCACGT ACCGGCAGAC
GACCGCGATA CGTGGGTTCA GATGGGTATG GCTATCAAGG CCGAGTTCGG CGAAGCCGGG
TTCGACTTCT GGGACGACTG GTCGCGTTCT GCCTCGAACT ACAGCGAGGC CGATGCGAAA
TCGGTCTGGA AGTCGTTTCG CTCGGGCGGT ATCACGATCG CCAGTCTGTT CAAGCGAGCG
ATCGAGCATG GCTACCGTGA AAGCGAGCCC ATGACCGCGC TGTCGGCCGA CGAGCGCGAA
CGCCGCCGAG TTGAACGTGA TCGTGAAGCG GCCGCCGCCG CAGAGATCCA CCAACGCACG
CAGGCGGCCG CGGCCACCAG GGCACGCAAT CTCTGGGAGA AGGCCGGTAC CGTTCATGCG
GACCACGCCT ACGTCCGCGC GAAGCGAATC AAGCCCTACG GAGCGAAGCA ACTGCGTGAC
CAGCTCGTCG TCAAGCTGCA GGACATTGAC GGCGAGCACC ATTCCGCACA ATACATCCAG
GCAGATGGTC ACAAAACCTT CCAGACCGGT GGCCGAATCA GCGGGTGCTT CGTCGTGGTC
AGTGCCGGAG TCAAGCCGAA TGGCAAGACA CCGCTGCTAA TCTGCGAGGG TTACGCGACG
GCCTGTTCGC TTCACGAAGC AACGGGTTAT CCCGTCGCTG CGGCTATGAA TGCCGGTAAC
CTTCTGAACG TCGCGCGCGC CTGGCGCCAA AAGCATCCTG AGCTGCGTAT TGTGCTCTGT
GCGGACGACG ACGCGGAAAC TGCCGGTAAT CCGGGCATGA ACAAGGCAAC CGAGGCAGCG
CGCGCGGTCG CTGCATTTCT AGCGGTGCCT GACTTCGGTA AAGACCGCCC CGCACAAGTA
TCGGATTTCA ATGACCTGCA CTGCCTCGAT GGGCTCGAGG TGGTACGACG CTGCGTCGAC
GCGGCGACTG CGGCGGTCGA CGCCACCGCC CCTAAGAAGC GCCCGGCGCC GACCGTCAAC
CTCTCCTGCG CGGCCGACAT CGTGCCGGAG CCGATTCACT GGCTCTGGCC TGGCTGGCTG
CCTGCCGGCA AGCTCTCGAT CCTCGCCGGG CAACCTGGGT GCGGAAAAAC GACCATTGCC
ATTTCGCTGT CGTCTGCCAT CTCGAACGGC GCAGAGTGGC CGGACGGTGC ACGCTGCAAA
GCGCCGGGAA ACGTTTTGAT CTGGACCGGA GAAGACGGGC TCGCCGATAC GCTTGTCCCT
CGCCTTATGG CAGCCGGCGC TGATCTCAGG CGCGTTTTCT TCGTGGAGTC GATCACGAAT
GAGGCGGGCG GGCTCCAGCC ATTCGATCCA AGCCGCGATG TTCCCATTCT GGCCGAGCGC
GTCGAGCAGA TCGGCGGTGC GAGCATGCTT GTCGTCGATC CAATCATCAG TGTGGTGAAC
GGCGACTCTC ACAAGTCCGG CGACGTTCGG AAATCGCTTC AGCCGCTGAT CGACCTCGGG
GCTGCCCACG GGTGCGCAAT CCTCGGCATC ACGCACTTCT CGAAGGGCTC GAAGGGCTCA
TCGCCGACCG AGCGCATTCT TGGCTCGCAG GCGTTCGGCG CCGCTGCGCG GATGATTCTG
GTCGCCGGCA AGGATGACGC GTCAGACCGC CGGATCTTCG CCAAGTCGAA ATGCAATATC
GCCGGCGATT CCGGGGGGTT CGAGTATGCG ATCGAAACGC TCGACGCTCA GGACGGTCTC
GCATCAAGCC GGATCGCATG GGGCGAACCT CTCGACGGCT CGGCGCGCGA GATCCTCCGC
GAACTGGAGG CCGATGACCA GGACACCGAC GAGCAGAACG AGCGCGAATC GAAGTTCGAG
CGTGCACGTT GCATGCTTTA CGAATGGCTA ACTCCTTTCA TGAGCACCAA GGAGATGAAA
GCAGCGGCCC AGGCCGAAGG CGTGAGCTGG CGTATGGTGG AAGCTGCCAA GGCCGCCGAG
GTGAAGGCCG GCAACAAAAT CCGAGCCGTG AAGCATGGCA AGGATTGGGG ATGGATTTGG
GATAATCACG ACGCCAAGTA CGGCGATTCA ACTCCGCACT CGCAGATCGT CTCAAGTCCG
CAAGAAATTC AAGTCCGCAA AGGCGATTGC GGAGTTGAAT CCATTATCCA GCAAGGATCA
GAAGCCAAGT CCGCAAGTCC GCAGTCGGTT GGCGGGGTTG CCGGCATTGC CCACACATGT
CCGCAATCCC CCGTCAACTC CGTACACTCA GGAAATCATT GCGGAGTTGC GGACTTGACG
GCAAACCCTT ACCCATCAAG GGAGTCAACT CCGCAATCAC GTCCGCATCC CGTCTCAGAC
TGCGGACTTG ACGGTGATGT CGCGGCGGCG GCCGAACTGG AGGACGACGT ATGA
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| Protein sequence | MSVNVEQERM RAALSHVPAD DRDTWVQMGM AIKAEFGEAG FDFWDDWSRS ASNYSEADAK
SVWKSFRSGG ITIASLFKRA IEHGYRESEP MTALSADERE RRRVERDREA AAAAEIHQRT
QAAAATRARN LWEKAGTVHA DHAYVRAKRI KPYGAKQLRD QLVVKLQDID GEHHSAQYIQ
ADGHKTFQTG GRISGCFVVV SAGVKPNGKT PLLICEGYAT ACSLHEATGY PVAAAMNAGN
LLNVARAWRQ KHPELRIVLC ADDDAETAGN PGMNKATEAA RAVAAFLAVP DFGKDRPAQV
SDFNDLHCLD GLEVVRRCVD AATAAVDATA PKKRPAPTVN LSCAADIVPE PIHWLWPGWL
PAGKLSILAG QPGCGKTTIA ISLSSAISNG AEWPDGARCK APGNVLIWTG EDGLADTLVP
RLMAAGADLR RVFFVESITN EAGGLQPFDP SRDVPILAER VEQIGGASML VVDPIISVVN
GDSHKSGDVR KSLQPLIDLG AAHGCAILGI THFSKGSKGS SPTERILGSQ AFGAAARMIL
VAGKDDASDR RIFAKSKCNI AGDSGGFEYA IETLDAQDGL ASSRIAWGEP LDGSAREILR
ELEADDQDTD EQNERESKFE RARCMLYEWL TPFMSTKEMK AAAQAEGVSW RMVEAAKAAE
VKAGNKIRAV KHGKDWGWIW DNHDAKYGDS TPHSQIVSSP QEIQVRKGDC GVESIIQQGS
EAKSASPQSV GGVAGIAHTC PQSPVNSVHS GNHCGVADLT ANPYPSREST PQSRPHPVSD
CGLDGDVAAA AELEDDV
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