Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_2397 |
Symbol | |
ID | 4309517 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | - |
Start bp | 2645908 |
End bp | 2647857 |
Gene Length | 1950 bp |
Protein Length | 649 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638150231 |
Product | ABC transporter related |
Protein accession | YP_774287 |
Protein GI | 115352448 |
COG category | [R] General function prediction only |
COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGCTTT ATTCCATTAC CGGCGCGCAA CTCGCGTTCG GTCACGTCGC GTTGCTCGAT CACGCGGACT TCTCGCTGGA AGCCGGCGAG CGCGTCGGCC TGATCGGCCG CAACGGCGCG GGCAAGTCGT CGCTGCTGAA GATCGTCGCC GGGCTCGCGA AGCCCGATGA CGGGCTGATC ACGCGCCAGC AGGAGCTCGT GACCGTCTAC GTGCCGCAGG AGCCCGAATT CGAACCCGGC GCGACGGTGT TCGAGGCCGT GGCTTCGGGG CTCACGCACG CGCGCGAAGT GCTCGAAGAA TACGATTCGA TCGCGCACCG GCTCGCCGAG ACACCCGAAG GCGCTGAGCA CGATGCGCTG CTCGCGCGGA TGAACGCGCT GCAGTCGTCG CTCGACATGC ACGACGCGTG GAACTGGCGC ACGCGCGTGT CGATGACGCT CGCGCAGATC GGCCTGACGG ACGGCGATGC CAGCGTCGAC GCGCTGTCGG GCGGGATGCA GAAGCGCGTC GCGCTGGCGC GCGCGCTGGT GCTGCAACCC GACGTGCTGC TGCTCGACGA GCCGACCAAC CACCTCGACT TCGACGGCAT CCGCTGGCTG GAAGAACTGC TGGTCTCGCA GCGCGCGGGC CTGCTGTTCA TCACCCACGA TCGCGCGTTC CTCGACCGCG TCGCGACACG CATCGTCGAG CTCGATCGCG GCGGGCTGCT GTCGTATCCG GGCAATTTCT CCGCGTACCA GACGCGCAAG GCGCAGCAGC TCGAAGTCGA GCGCGTGGAA AACGAGAAAT TCGACAAGCT GCTCGCGCAG GAAGAAGTGT GGATCCGCAA GGGCGTCGAG GCGCGCCGTA CGCGCAGCGT CGGGCGCATC GCGCGGCTCG TGCAGATGCG CAACGAGCGC GCGGAGCGCC GCAATTCGCA GGGCAACGTG AGGCTCGACG TCGCGCAGGG CGAGAAGTCG GGCAAGATCG TCGCGGAACT GAAGGACGTG ACGAAGCGCT ACGGCGATCG AACGGTGGTC GATACGTTTT CGACGTCGGT CATGCGCGGC GACAAGATCG GTTTCGTCGG CCCGAACGGC GCGGGCAAGA CCACGCTGCT CAAGCTGATC CTCGGCGAGC TGAAGCCCGA CACGGGCACG GTGCGCACGG GCACGAACCT GCAGGTCGCG TATTTCGACC AGATGCGCGC GCAGCTCGAC CAGGACAAGA GCCTGGCCGA TACGATCAGC CCCGGTAGCG AATGGGTCGA GATCGGCGGC GTGCGCAAGC ACGTGATGAG CTATCTCGGC GACTTCCTGT TCGCGCCGGA ACGCGCGCGC TCGCCGGTGA AGTCGTTGTC GGGCGGCGAG CGCAACCGGC TGCTGCTCGC GCGCCTGTTC GCGCGTCCGG CCAACGTGCT GGTGCTCGAC GAACCGACCA ACGACCTCGA CATCCCGACG CTCGAACTGC TCGAAGAGCT GCTGGCCGAC TATGACGGCA CGGTGCTGCT CGTCAGCCAC GATCGCGCGT TCCTCGACAA CGTCGTGACG TCGGTGATCG CGGCGGAGGG CGACGGCAAG TGGCGCGAAT ACGTCGGCGG CTTCACCGAC TGGCAGATCC AGAGCGAGCG TTCACAGCAG CTCGCGCAGC AGGAAGCGGC GAAGCGCGCG GTGAAGGAAG CGGCGCCGGT CAAGGAAGAC CCGGCGAAAA GCGCGGCCGG CCGCAACGCG CAGCGCACGG TCAAGCTGTC GTTCAACGAG CAGCGCGAAC TCGATGCGCT GCCGCAGAAG ATCGCGGCGC TCGAGGAAGA ACAGAAGACG ATCAACGCGC AGCTCGAGGA CGGCGCGATC TTCGCGAAGG ATCCGCAGGA AGGCAGGCGC CTGACCGAAC GGTTCGCGGC GATCGACGAC GAACTGCTCG CCGCGCTCGA GCGGTGGGAA ACGCTCGAGG CGAAGCGCAA ACCGGTCTGA
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Protein sequence | MSLYSITGAQ LAFGHVALLD HADFSLEAGE RVGLIGRNGA GKSSLLKIVA GLAKPDDGLI TRQQELVTVY VPQEPEFEPG ATVFEAVASG LTHAREVLEE YDSIAHRLAE TPEGAEHDAL LARMNALQSS LDMHDAWNWR TRVSMTLAQI GLTDGDASVD ALSGGMQKRV ALARALVLQP DVLLLDEPTN HLDFDGIRWL EELLVSQRAG LLFITHDRAF LDRVATRIVE LDRGGLLSYP GNFSAYQTRK AQQLEVERVE NEKFDKLLAQ EEVWIRKGVE ARRTRSVGRI ARLVQMRNER AERRNSQGNV RLDVAQGEKS GKIVAELKDV TKRYGDRTVV DTFSTSVMRG DKIGFVGPNG AGKTTLLKLI LGELKPDTGT VRTGTNLQVA YFDQMRAQLD QDKSLADTIS PGSEWVEIGG VRKHVMSYLG DFLFAPERAR SPVKSLSGGE RNRLLLARLF ARPANVLVLD EPTNDLDIPT LELLEELLAD YDGTVLLVSH DRAFLDNVVT SVIAAEGDGK WREYVGGFTD WQIQSERSQQ LAQQEAAKRA VKEAAPVKED PAKSAAGRNA QRTVKLSFNE QRELDALPQK IAALEEEQKT INAQLEDGAI FAKDPQEGRR LTERFAAIDD ELLAALERWE TLEAKRKPV
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