| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_2291 |
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| Symbol | |
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| ID | 4309088 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 2526727 |
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| End bp | 2528871 |
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| Gene Length | 2145 bp |
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| Protein Length | 714 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638150125 |
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| Product | polynucleotide phosphorylase/polyadenylase |
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| Protein accession | YP_774181 |
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| Protein GI | 115352342 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0701506 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCATGT TCAACAAGGT CGTGAAGGAA TTCCAGTGGG GCCAGCACAA GGTGCGCCTC
GAAACCGGTG AAGTCGCGCG TCAGGCGAGC GGTGCCGTGA TCGTCGACGT GGAAGACACC
GTCGTGCTGG CAACCGTCGT CGGCGCGAAG TCGGCGAAGC CGGGCCAGGA TTTCTTCCCG
CTGACCGTCG ACTACCTCGA AAAGACCTAC TCGGCCGGCA AGATCCCGGG CGGCTTCTTC
CGTCGCGAAG GCCGTCCGTC GGAACACGAG ACGCTGACGT CGCGCCTGAT CGACCGTCCG
CTGCGTCCGC TGTTCCCGGA AGGCTTCTAC AACGAAGTGC AGGTCGTGAT CCACGTGCTG
TCCGTGAACC CGGAAATTCC GGCGGACATC CCCGCGCTGA TCGGCGCATC GGCCGCGCTC
GCCGTGTCGG GTCTGCCGTT CAACGGTCCG GTCGGTGCCG CGCGCGTGGC GTACATCGAC
AACGCATACG TGCTGAACCC GACGCGTGAC CAGCTCAAGG CATCGAGCCT CGACCTCGTC
GTCGCCGGTA CGGAGCGCGC GGTGCTGATG GTCGAATCGG AAGCCGATCA ACTGCCGGAA
GACGTGATGC TGGGCGCGGT CGTGTTCGGT CACGAGCAGA TGCAGACGGC GATCGACGCG
ATCCACGAAC TCGTGCGCGA AGGCGGCAAG CCCGAGTGGG ACTGGCAGCC GGCCCCGAAG
AACGAGGCGC TGATCGCGCG CGTGACGGAA CTGGCGCACG GCGACCTGCT CGCCGCCTAC
CAGCTGCGCG ACAAGCAAGC GCGTTCGACG AAGCTGAAGG AAGTCTACGC GGCGACCTCG
GCGAAGCTCG AGGAAGATGC ACAGGCGGCC GGCACGGTCG CGGCCGACAA GGCCACCGTC
GGCAACGTCC TGTTCGACAT CGAAGCGAAG ATCGTCCGTT CGCAGATCCT GAACGGCGAG
CCGCGCATCG ACGGTCGTGA CACGCGCACC GTGCGTCCGA TCGAGATCCG CACCGGCGTG
CTGCCGCGCA CCCACGGTTC GGCGCTGTTC ACGCGTGGCG AAACGCAGGC GCTCGTCGTC
GCGACGCTCG GCACGAAGGG TGACGAGCAG ATCATCGACG CGCTGGAAGG CGAATACCGC
GAGCGCTTCA TGCTCCACTA CAACATGCCC CCGTTCGCGA CCGGCGAAAC GGGCCGCGTC
GGCTCGCCGA AGCGCCGCGA AATCGGCCAC GGCCGCCTCG CGAAGCGTGC GCTGGTCAAG
TGCCTGCCGA GCGCCGACGA ATTCGGCTAC TCGATCCGCG TCGTGTCGGA AATCACCGAA
TCGAACGGTT CGTCGTCGAT GGCGTCGGTG TGCGGCGGCT GCCTCGCGCT GATGGACGCC
GGCGTGCCGA TGAAGGCGCA CGTCGCGGGT ATCGCGATGG GCCTGATCCT CGAAGGCAAC
AAGTTCGCGG TGCTGACCGA CATCCTCGGC GACGAAGATC ACCTCGGCGA CATGGACTTC
AAGGTGGCCG GCACGGAGCA AGGCGTGACG GCGCTGCAGA TGGACATCAA GATCCAGGGC
ATCACGAAGG AAATCATGCA GGTCGCGCTC GCGCAGGCGA AGGAAGGCCG CATGCACATC
CTCGGCAAGA TGACGTCGGC GGTCTCGGGT GCGAACACGC AGCTGTCGGA ATTCGCGCCG
CGCATGATCA CGATCAAGAT CAATCCGGAA AAGATCCGCG ACGTGATCGG CAAGGGCGGT
TCGGTGATCC GCGCGCTGAC GGAAGAAACG GGCACGACCA TCGACATCTC GGATGACGGC
GTCGTGACGA TCGCGAGCAC GAGCAGCGAA GGCATGGCCG AAGCGAAGAA GCGCATCGAG
AACATCACGG TCGAGATCGA AGTCGGCCAG GTGTACGAAG GCACGGTGCT CAAGCTGCTC
GATTTCGGTG CGATCGTGAA CCTGCTGCCG GGCAAGGATG GCCTGCTGCA CATCTCGGAA
ATCGTCAACG AGCGCGTGAA GGACATCAAC GACTACCTGA AGGAAGGCCA GCAGGTTAAG
GTCAAGGTGA TCCAGACGGA CGAGAAGGGT CGCGTGCGTC TGTCGGCGAA GGCGCTGCTG
AACGAAGCAG CGGCGTCGCA GTCGGATACG CCGCCGCAGC AGTAA
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| Protein sequence | MSMFNKVVKE FQWGQHKVRL ETGEVARQAS GAVIVDVEDT VVLATVVGAK SAKPGQDFFP
LTVDYLEKTY SAGKIPGGFF RREGRPSEHE TLTSRLIDRP LRPLFPEGFY NEVQVVIHVL
SVNPEIPADI PALIGASAAL AVSGLPFNGP VGAARVAYID NAYVLNPTRD QLKASSLDLV
VAGTERAVLM VESEADQLPE DVMLGAVVFG HEQMQTAIDA IHELVREGGK PEWDWQPAPK
NEALIARVTE LAHGDLLAAY QLRDKQARST KLKEVYAATS AKLEEDAQAA GTVAADKATV
GNVLFDIEAK IVRSQILNGE PRIDGRDTRT VRPIEIRTGV LPRTHGSALF TRGETQALVV
ATLGTKGDEQ IIDALEGEYR ERFMLHYNMP PFATGETGRV GSPKRREIGH GRLAKRALVK
CLPSADEFGY SIRVVSEITE SNGSSSMASV CGGCLALMDA GVPMKAHVAG IAMGLILEGN
KFAVLTDILG DEDHLGDMDF KVAGTEQGVT ALQMDIKIQG ITKEIMQVAL AQAKEGRMHI
LGKMTSAVSG ANTQLSEFAP RMITIKINPE KIRDVIGKGG SVIRALTEET GTTIDISDDG
VVTIASTSSE GMAEAKKRIE NITVEIEVGQ VYEGTVLKLL DFGAIVNLLP GKDGLLHISE
IVNERVKDIN DYLKEGQQVK VKVIQTDEKG RVRLSAKALL NEAAASQSDT PPQQ
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