| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_2228 |
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| Symbol | |
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| ID | 4311451 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 2460679 |
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| End bp | 2462694 |
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| Gene Length | 2016 bp |
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| Protein Length | 671 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638150056 |
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| Product | Na+/solute symporter |
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| Protein accession | YP_774118 |
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| Protein GI | 115352279 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4147] Predicted symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family
[TIGR03648] probable sodium:solute symporter, VC_2705 subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGACGC ATCGACTGAT TCGCGCGTAC GCGCTCTACA CGCTCGGCTT TCTGGGCTTC
GTGCTGCTGC TGTGGCGGAT CGAGCGCGCG GCCGGCTCCG GCGTCTGGAT CGGCTACGTG
TTCCTGTTCG TGCCGATCGC CGTGTATGCG GTGATCGGGC TGCTGTCGCG CACGTCCGAT
CTCGTCGAAT ACTACGTGGC CGGGCGGCGC GTGCCGTCCG CGTTCAACGG GATGGCGACC
GCGGCTGACT GGCTGTCGGC GGCGTCGTTC ATCGGTCTCG CCGGCTCGCT TTACGCAACC
GGCTACGATG CGCTCGCCTA CGTGATGGGG TGGACGGGCG GGTTCTGCCT CGTCGCGTTC
CTGCTCGCGC CGTACGTGCG CAAGCTCGCG CGCTACACGA TTCCCGATTT TCTCGGCACG
CGCTTTTCGA GTACGGCCGT GCGCGCGCTG GCGGCCGGTG CGGCGATCCT GTGCTCGTTC
GTTTATCTGG TCGCGCAGAT CCAGGGGATC GGGCTGATCG CGACGCGCTT CATCGGCGTC
GACTTCGCGA TCGGCATCTT CTGCGGGCTC GCGGGCATTC TCGTGTGCTC GTTTCTCGGC
GGCATGCGCG CGGTCACGTG GACGCAGGTC GCGCAGTACA TCATCCTGAT CAGCGCGATC
CTGATCCCCG TGTCGCTGAT CGCGATGAAG AACGGGCTCG GGCCGGTGCC GCAGTTCAAT
TACGGCAAGC TAATGGAGCG TGTGGCGGCG CGCGAGGCGC AAGTGCGCGA CGCGGCCGAG
GAGCAGCAGG TGCGCGATGC GTATCGCGGG CAGGCCGCGC TCGTCCAGGC GCAGCTCGAT
CGCTTGCCCG GATCGTATGC GGACGCACGC CGGCAACTCG TCGACCAGCT TGCGGACCTG
CGGCGCCATA ACGGGCCGCT GCGCGAGATT AACCAGCGCG AGCGCGAGCT GGCCGACTTC
CCGCGCGACC CGACGGGCGC GCGCGTGATC TGGACCCAGG CGCGCGACGA CCTGCTGGCG
CGCGCCGAGC CGCCCGTGCC GATGCACGAG CCGTTTCCTG CCGCGAGCGA CGACGAGCGC
AAGCCGCGCG AGCGGAATTT CCTGGCGCTG CTGCTGTGCC TGTCGCTCGG CACCGCGAGC
CTGCCGCACA TCCTCACGCG CTACAACACG ACGACGTCGG TGGCGTCCGC GCGGCGCTCG
GTCGGCTGGA CGCTGTTCTT CATCGCGCTG TTCTACCTGA GCGTGCCGGT GCTCGCGGTG
ATGATCAAGT ACGAGATTCT CACCAGCCTT GTCGGGCGGC CGATCGCCGA GCTGCCTGCG
TGGGTCACGC AGTGGCATCA CTTCGAACCG GACCTGATCA GCGTCGTCGA GGTGATTCGC
GACGGCATCG TCCACTGGTC GGAAATCCAG ATGCAGCCGG ACATGGTCGT GCTGGCCGCG
CCGGAGATCG CGGGGCTGCC GTATGTCGTG TCGGGGTTGA TCGCGGCCGG TGCGCTGGCC
GCGGCGCTGT CGACCGCGGA CGGATTGCTG CTGACGATCG CGAATGCGTT GTCGCACGAC
GTCTATTACT GCATGGTCGC GCCCGATGCA TCGAGCCAGC GGCGCGTGAC CGTCTCGAAG
GTGCTGCTGC TCGGCGTTGC GCTGTTCGCG TCGTATGTCG CGTCGCTCAA TACGGGGAAG
ATTCTGTTTC TCGTCGGTGC GGCGTTTTCG CTCGCGGCGT CCAGTTTCTT TCCGGTGCTC
GTGCTGGGGG TGTTCTGGAA ACGGACGACG ACGCGCGGCG CGATCGCCGG GATGGTGACG
GGGCTTGCGG TGTGCGTGTA CTACATCGTG TCGACGTATC CCTATTTCAC GCAGTTGACG
GGGTTTGCGG GGCGGACGTG GTTCGGGATC GAGCCGATCA GTTCAGGCGT GTTCGGGGTG
CCGGCGGGGT TTGTGGTGGC GATCGCGGTC AGTCTGGTCG ATCGGGAGCC GGATGAGTAT
ACGCGGGCGT TGGTGGATTA TATTCGGCAT CCGTGA
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| Protein sequence | MLTHRLIRAY ALYTLGFLGF VLLLWRIERA AGSGVWIGYV FLFVPIAVYA VIGLLSRTSD
LVEYYVAGRR VPSAFNGMAT AADWLSAASF IGLAGSLYAT GYDALAYVMG WTGGFCLVAF
LLAPYVRKLA RYTIPDFLGT RFSSTAVRAL AAGAAILCSF VYLVAQIQGI GLIATRFIGV
DFAIGIFCGL AGILVCSFLG GMRAVTWTQV AQYIILISAI LIPVSLIAMK NGLGPVPQFN
YGKLMERVAA REAQVRDAAE EQQVRDAYRG QAALVQAQLD RLPGSYADAR RQLVDQLADL
RRHNGPLREI NQRERELADF PRDPTGARVI WTQARDDLLA RAEPPVPMHE PFPAASDDER
KPRERNFLAL LLCLSLGTAS LPHILTRYNT TTSVASARRS VGWTLFFIAL FYLSVPVLAV
MIKYEILTSL VGRPIAELPA WVTQWHHFEP DLISVVEVIR DGIVHWSEIQ MQPDMVVLAA
PEIAGLPYVV SGLIAAGALA AALSTADGLL LTIANALSHD VYYCMVAPDA SSQRRVTVSK
VLLLGVALFA SYVASLNTGK ILFLVGAAFS LAASSFFPVL VLGVFWKRTT TRGAIAGMVT
GLAVCVYYIV STYPYFTQLT GFAGRTWFGI EPISSGVFGV PAGFVVAIAV SLVDREPDEY
TRALVDYIRH P
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