Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_2180 |
Symbol | |
ID | 4310086 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | + |
Start bp | 2398346 |
End bp | 2399038 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638150005 |
Product | aspartate racemase |
Protein accession | YP_774070 |
Protein GI | 115352231 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1794] Aspartate racemase |
TIGRFAM ID | [TIGR00035] aspartate racemase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGACGA TCGGACTGAT CGGCGGGATG AGCTGGGAAT CGTCGGCGGA GTACTACCGG ATGATCAATC GCCATTCGAA GGCGCTGCAC GGCGGCCATC ACAACGCGAA GAGCGTGCTG GTCACGGTCG ATTTCGCCGA GATCGAAGCG CTGCAGCGCG CGCAGGACTG GGTCGCGCTC GGCGAACGGA TGGCCGACGC CGCGCGGCAA CTCGAAGCGG CCGGCGCCGA TCTCGTCGTG CTGACGACCA ACACGATGCA CCGCGTATAT GGCGCGATCG AAGCTGCGGT CGCGCTGCCG TTCCTGCACA TCGCCGATCC GACCGGCGCC GCGCTGCGCG CCGCGGGCGT CGAGCGCGTC GCGCTGCTCG GCACGCGCTA CACGATGGAA TTGCCGTTCT ATGCGGAGCG TTTGCGCGAC AAGTTCGGCC TCGACGTGCT GGTGCCGGAC GAAGCCGCGC GCGGCGACGT GCACCGGATC ATCTACGACG AGCTGTGTCA CGGCGTGATC GATGCGGCGT CGCGCGCAAC CTACGTGGCG ATCATCGACG AACTGGCGAA ACGCGGCGCG CAAGCCGTGA TTCTCGGCTG CACGGAAATC ACGCTGCTGA TCGGCGCGGA CGATTCGCCG CTGCCGGTAT TCGATACGAC CGCGCTGCAT GCGAAGGCGG CGGTCGAGTG GGCGGCGGGC TGA
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Protein sequence | MKTIGLIGGM SWESSAEYYR MINRHSKALH GGHHNAKSVL VTVDFAEIEA LQRAQDWVAL GERMADAARQ LEAAGADLVV LTTNTMHRVY GAIEAAVALP FLHIADPTGA ALRAAGVERV ALLGTRYTME LPFYAERLRD KFGLDVLVPD EAARGDVHRI IYDELCHGVI DAASRATYVA IIDELAKRGA QAVILGCTEI TLLIGADDSP LPVFDTTALH AKAAVEWAAG
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