Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_2172 |
Symbol | |
ID | 4311037 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | - |
Start bp | 2383603 |
End bp | 2385369 |
Gene Length | 1767 bp |
Protein Length | 588 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 638149997 |
Product | dihydrolipoamide dehydrogenase |
Protein accession | YP_774062 |
Protein GI | 115352223 |
COG category | [C] Energy production and conversion |
COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTCTCA TCGAAGTCAA AGTTCCGGAT ATCGGCGATT TCAGCGGCGT CGATGTCATC GAAGTCAACG TGAAACCCGG CGACGTGATC GAAAAAGAGC AAACGCTCAT CACGCTCGAA TCCGATAAAG CCTCCATGGA AGTGCCCAGC GACGTCGCCG GCACCGTCAA GGAAGTCAAG GTCAAAGCCG GCGAGAAAGT CTCGCAAGGC ACCATCATCG CCATCGTCGA AGCAGCAGCA ACCGACGCCG CACCCGTGAA AGCTCCGGAA CCGGCCAAGC CGGCAGCCGC TGCGCCGGCA CCGGCCGCAG CCGCTCCCGC AGCCGCGCCG CAAGCCGGCA GCTACAGCGG CACCGCCGAC ATCGAGTGCG ACATGCTCGT GCTCGGCGCC GGCCCCGGCG GCTATTCGGC CGCGTTCCGC TCGGCCGACC TCGGCATGAA GACGGTGCTG GTCGAACGCT ATTCGACGCT CGGCGGCGTG TGCCTGAACG TCGGTTGCAT CCCGTCGAAG GCACTGCTGC ACACGGCGCT CGTCATCGAC GAAGCCGCGG CGCTCGCGTC GCACGGCATC ACGTTCGGCA AGCCGGAAGT CGATCTCGAC AAGCTGCGCG ACTTCAAGGG CGGCGTCGTC AAGAAACTGA CGACGGGCCT CGCCGGCATG GCGAAGGCGC GCAAGGTCGA AGTCGTCACC GGCGTCGGCG CATTCGTCGA TCCGTATCAC ATGGAAGTGC AGGGCGAAAA CGGCAAGAAG GTCGTCAAGT TCAAGCAGGC AATCATCGCC GCGGGCTCGC AAGCGGTGAA GCTGCCGTTC ATGCCGGAAG ACCCGCGCGT CGTCGATTCG ACGGGCGCAC TGGAACTGCG CCAACTGCCG AAGCGGATGC TGGTGATCGG CGGCGGCATC ATCGGCCTCG AAATGGCCAC GGTGTACGCA ACGCTCGGCG CCGAGATCGA CGTGGTCGAA ATGATGGACG GCCTGATGAT GGGCGCGGAC CGCGATCTCG TGAAGGTCTG GGAAAAGTAC AACGCGAAGC GCTTCGGCAA CGTGATGCTG AAGACCAAGA CGGTCGGCGC GGAAGCGAAG GAAGACGGCA TCTACGTGAA GTTCGAGGGC GAGAAGGCGC CGGCGGAAGC GCAGCGCTAC GACCTCGTGC TCGTCGCGGT GGGCCGCAGC CCGAACGGCA AGACGATCGG CGCCGACAAG GCGGGCGTGG CCGTCACCGA CCGCGGCTTC ATCGACGTCG ACAAGCAGAT GCGCACGAAC GTCCCGCACA TCTTCGCGAT CGGCGACGTC GTCGGCCAGC CGATGCTCGC GCACAAGGCC GTGCACGAAG GGCACGTCGC AGCGGAAGCC GCGCACGGCG AGAAGGCATA CTTCGACGCG CTGCAGATCC CGTCGGTGGC CTATACCGAT CCGGAAGTGG CGTGGGCCGG CAAGACGGAA GACCAGTGCA AGGCCGAAGG CATCAAGTAC GGCAAGGCGG TGTTCCCGTG GGCCGCATCG GGCCGCGCGA TCGCGAACGG CCGCGACGAA GGCTTCACGA AGCTGATCTT CGACGAGGAA ACCCATCGCG TGATCGGCGG CGGCATCGTC GGCCTGAACG CGGGCGACCT AATCAGCGAA GTATGTCTCG CCGTCGAGAT GGGCGCGGAC GCGGAAGACA TCGGCAAGAC GATCCATCCG CACCCGACGC TCGGCGAATC GATCGGCATG GCCGCCGAAC TGTACGAAGG CGTGTGTACG GACCTGCCGC CGCAACGCAA GAAGTAA
|
Protein sequence | MSLIEVKVPD IGDFSGVDVI EVNVKPGDVI EKEQTLITLE SDKASMEVPS DVAGTVKEVK VKAGEKVSQG TIIAIVEAAA TDAAPVKAPE PAKPAAAAPA PAAAAPAAAP QAGSYSGTAD IECDMLVLGA GPGGYSAAFR SADLGMKTVL VERYSTLGGV CLNVGCIPSK ALLHTALVID EAAALASHGI TFGKPEVDLD KLRDFKGGVV KKLTTGLAGM AKARKVEVVT GVGAFVDPYH MEVQGENGKK VVKFKQAIIA AGSQAVKLPF MPEDPRVVDS TGALELRQLP KRMLVIGGGI IGLEMATVYA TLGAEIDVVE MMDGLMMGAD RDLVKVWEKY NAKRFGNVML KTKTVGAEAK EDGIYVKFEG EKAPAEAQRY DLVLVAVGRS PNGKTIGADK AGVAVTDRGF IDVDKQMRTN VPHIFAIGDV VGQPMLAHKA VHEGHVAAEA AHGEKAYFDA LQIPSVAYTD PEVAWAGKTE DQCKAEGIKY GKAVFPWAAS GRAIANGRDE GFTKLIFDEE THRVIGGGIV GLNAGDLISE VCLAVEMGAD AEDIGKTIHP HPTLGESIGM AAELYEGVCT DLPPQRKK
|
| |