Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_2163 |
Symbol | |
ID | 4311028 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | - |
Start bp | 2374869 |
End bp | 2376092 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 638149988 |
Product | cysteine desulfurase |
Protein accession | YP_774053 |
Protein GI | 115352214 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes |
TIGRFAM ID | [TIGR02006] cysteine desulfurase IscS [TIGR03402] cysteine desulfurase NifS |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.675105 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCAAG AGACTCTCCA CCTGCCCATC TACATGGATT ACAGCGCGAC GACGCCGGTC GACCCGCGCG TGGTCGACAA GATGGTGCCG TACCTGCGCG AGCAGTTCGG CAACCCGGCA TCGCGCAGCC ACGCATACGG CTGGGATGCG GAGCGCGCGG TCGAGGAAGC GCGCGAGCAG GTGGCCGCGC TGGTGAACGC GGATCCGCGC GAGATCATCT GGACGTCCGG CGCCACGGAG TCGGACAACC TCGCGATCAA GGGTGCCGCG AACTTCTACA AGGGCAAGGG CAAGCACATC ATCACGGTGA AGACCGAGCA CAAGGCCGTG CTCGATACCT GCCGCGAGCT TGAGCGCGAC GGCTTCGAAG TCACCTATCT CGACGTGAAG GAAGACGGCC TGATCGACCT CGACGTGTTC AAGGCCGCGC TGCGCCCGGA CACGATCCTC GTGTCGGTGA TGCACGTGAA CAACGAGATC GGCGTGATCC AGGATATCGA GACGATCGGC GAGATCTGCC GCGAGAAGGG CATCGTGTTC CACGTCGACG CCGCGCAGTC GACCGGCAAG GTCGAGATCG ACCTCGCGAA GCTGAAGGTC GACCTGATGT CGTTCTCGGC ACACAAGACC TACGGCCCGA AGGGCATCGG CGCGCTGTAC GTGCGCCGCA AGCCGCGCGT GCGCATCGAA GCGCAGATGC ACGGCGGCGG TCACGAGCGC GGGATGCGTT CGGGCACGCT GGCGACGCAC CAGATCGTCG GCATGGGCGA AGCGTTCCGC ATCGCGCGCG AAGAAATGGC GACCGAGAAC GAGCGCGTGC GCATGCTGCG CGACAAGCTG CTGCGCGGCC TGTCGCAGAT CGAGGAAACC TACGTGAACG GCGACATGGA GCATCGTGTC CCGCACAACC TGAACATCAG TTTCAACTTC GTCGAAGGCG AGTCGCTGAT CATGGCGATC AAGGATGTCG CGGTGTCGTC GGGTTCGGCC TGCACGTCGG CGTCGCTGGA GCCTTCGTAC GTGCTGCGCG CGCTCGGCCG CAACGACGAA CTCGCGCACA GCTCGATCCG CTTCACGGTC GGCCGTTTCA CGACGGAGCA GGACGTCGAC TTCGTGATCA ACCTGCTGAA CAGCAAGATC GCGAAGCTGC GCGAACTGTC GCCGCTCTGG GAAATGCACC AGGAAGGCAT CGATCTGTCG ACGATCGAAT GGGCTGCGCA CTGA
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Protein sequence | MTQETLHLPI YMDYSATTPV DPRVVDKMVP YLREQFGNPA SRSHAYGWDA ERAVEEAREQ VAALVNADPR EIIWTSGATE SDNLAIKGAA NFYKGKGKHI ITVKTEHKAV LDTCRELERD GFEVTYLDVK EDGLIDLDVF KAALRPDTIL VSVMHVNNEI GVIQDIETIG EICREKGIVF HVDAAQSTGK VEIDLAKLKV DLMSFSAHKT YGPKGIGALY VRRKPRVRIE AQMHGGGHER GMRSGTLATH QIVGMGEAFR IAREEMATEN ERVRMLRDKL LRGLSQIEET YVNGDMEHRV PHNLNISFNF VEGESLIMAI KDVAVSSGSA CTSASLEPSY VLRALGRNDE LAHSSIRFTV GRFTTEQDVD FVINLLNSKI AKLRELSPLW EMHQEGIDLS TIEWAAH
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