Gene Bamb_2163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_2163 
Symbol 
ID4311028 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp2374869 
End bp2376092 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content64% 
IMG OID638149988 
Productcysteine desulfurase 
Protein accessionYP_774053 
Protein GI115352214 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes 
TIGRFAM ID[TIGR03402] cysteine desulfurase NifS
[TIGR02006] cysteine desulfurase IscS 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.675105 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCAAG AGACTCTCCA CCTGCCCATC TACATGGATT ACAGCGCGAC GACGCCGGTC 
GACCCGCGCG TGGTCGACAA GATGGTGCCG TACCTGCGCG AGCAGTTCGG CAACCCGGCA
TCGCGCAGCC ACGCATACGG CTGGGATGCG GAGCGCGCGG TCGAGGAAGC GCGCGAGCAG
GTGGCCGCGC TGGTGAACGC GGATCCGCGC GAGATCATCT GGACGTCCGG CGCCACGGAG
TCGGACAACC TCGCGATCAA GGGTGCCGCG AACTTCTACA AGGGCAAGGG CAAGCACATC
ATCACGGTGA AGACCGAGCA CAAGGCCGTG CTCGATACCT GCCGCGAGCT TGAGCGCGAC
GGCTTCGAAG TCACCTATCT CGACGTGAAG GAAGACGGCC TGATCGACCT CGACGTGTTC
AAGGCCGCGC TGCGCCCGGA CACGATCCTC GTGTCGGTGA TGCACGTGAA CAACGAGATC
GGCGTGATCC AGGATATCGA GACGATCGGC GAGATCTGCC GCGAGAAGGG CATCGTGTTC
CACGTCGACG CCGCGCAGTC GACCGGCAAG GTCGAGATCG ACCTCGCGAA GCTGAAGGTC
GACCTGATGT CGTTCTCGGC ACACAAGACC TACGGCCCGA AGGGCATCGG CGCGCTGTAC
GTGCGCCGCA AGCCGCGCGT GCGCATCGAA GCGCAGATGC ACGGCGGCGG TCACGAGCGC
GGGATGCGTT CGGGCACGCT GGCGACGCAC CAGATCGTCG GCATGGGCGA AGCGTTCCGC
ATCGCGCGCG AAGAAATGGC GACCGAGAAC GAGCGCGTGC GCATGCTGCG CGACAAGCTG
CTGCGCGGCC TGTCGCAGAT CGAGGAAACC TACGTGAACG GCGACATGGA GCATCGTGTC
CCGCACAACC TGAACATCAG TTTCAACTTC GTCGAAGGCG AGTCGCTGAT CATGGCGATC
AAGGATGTCG CGGTGTCGTC GGGTTCGGCC TGCACGTCGG CGTCGCTGGA GCCTTCGTAC
GTGCTGCGCG CGCTCGGCCG CAACGACGAA CTCGCGCACA GCTCGATCCG CTTCACGGTC
GGCCGTTTCA CGACGGAGCA GGACGTCGAC TTCGTGATCA ACCTGCTGAA CAGCAAGATC
GCGAAGCTGC GCGAACTGTC GCCGCTCTGG GAAATGCACC AGGAAGGCAT CGATCTGTCG
ACGATCGAAT GGGCTGCGCA CTGA
 
Protein sequence
MTQETLHLPI YMDYSATTPV DPRVVDKMVP YLREQFGNPA SRSHAYGWDA ERAVEEAREQ 
VAALVNADPR EIIWTSGATE SDNLAIKGAA NFYKGKGKHI ITVKTEHKAV LDTCRELERD
GFEVTYLDVK EDGLIDLDVF KAALRPDTIL VSVMHVNNEI GVIQDIETIG EICREKGIVF
HVDAAQSTGK VEIDLAKLKV DLMSFSAHKT YGPKGIGALY VRRKPRVRIE AQMHGGGHER
GMRSGTLATH QIVGMGEAFR IAREEMATEN ERVRMLRDKL LRGLSQIEET YVNGDMEHRV
PHNLNISFNF VEGESLIMAI KDVAVSSGSA CTSASLEPSY VLRALGRNDE LAHSSIRFTV
GRFTTEQDVD FVINLLNSKI AKLRELSPLW EMHQEGIDLS TIEWAAH