| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_2153 |
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| Symbol | |
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| ID | 4311018 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 2364956 |
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| End bp | 2366653 |
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| Gene Length | 1698 bp |
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| Protein Length | 565 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 638149978 |
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| Product | single-stranded-DNA-specific exonuclease RecJ |
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| Protein accession | YP_774043 |
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| Protein GI | 115352204 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
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| TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000147893 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCGGA TCGTTACCCG CCCCGTCGCG CCCGCCGACG CAGAAGCGCT CGCGCGCCAC
GGCCTGCACC CTGTCCTCGC GCGGCTGTAT GCGTCGCGCG GCGTGCAGTC CCCGACCGAC
ATCGAGACCG CGCTCGCGCG CCTCGTGCCG CCCACCGAAC TGAAAGGCTG CGCGGACGCC
GCGGCGCTGC TCGCCGACGC GATCGCCGAC AAGCGGCGCC TGCTGGTCGT CGCCGACTAC
GATTGCGACG GCGCGACCGC CTGTGCGGTC GCGGTGCGCG GCCTGCGAAT GTTCGGCGCG
CAGATCGACT ACCTGGTGCC GAACCGCTTC GAATACGGCT ACGGGCTCAC GCCCGAGATC
GTCGAACTCG CGGCCGCACG CAAGCCCGAC CTGCTGATCA CCGTCGACAA CGGGATCGCG
AGCGTCGCAG GCGTCGAAGC GGCAAATGCA CGCGGCATCG ACGTGCTCGT GACCGACCAC
CACCTGCCCG GCGACGCGCT GCCCGCCGCG CGCGCGATCG TCAACCCGAA CCAGCCCGGC
TGCGCGTTCC CGAGCAAGCA CATCGCCGGT GTCGGCGTGA TGTTCTACGT GCTGCTCGCG
CTGCGCGCCG AGCTGCGCCG CCGCGGCGCG TTCGCGAGCA AGGAAGCCGA GCCGCGCCTC
GACGGCCTGC TCGACCTCGT CGCGCTCGGC ACCGTCGCCG ACGTGGTGCG GCTCGACGGC
AACAACCGCG TGCTCGTCGC GCAGGGGCTG CAGCGCATCC GCAACGGCCG CATGCAGCCG
GGCATCGCCG CGCTGTTCCG CGCCGCCGGC CGCGAGGCGC GCACCGCCTC AGGCTTCGAC
CTCGGCTTCG GCCTCGGCCC GCGCCTGAAT GCCGCCGGGC GGCTCTCGGA CATGTCGCTC
GGCATCGAAT GCCTGATCAC CGACGACATC GGCCGCGCGT GGGACCTCGC GCAGCAACTC
GACGTGATGA ACCGCGAGCG CCGCGAGATC GAGGCCGGCA TGCAGCAACA GGCGCTCGCC
GACCTCGCCG ACGTCGATCC GGCCGACGCG TGCACGATCA CGCTGTTCAA TCCCGAATGG
CACCAGGGCG TGATCGGGAT CGTCGCCGGG CGGCTCAAGG AGAAATTCCA CCGCCCGTCG
TTCACGTTCG CGCATGCGGA CGAAGCCGGC ACGCGGGTCA AGGGGTCGGG CCGCTCGATT
CCCGGCTTCC ACCTGCGCGA CGCGCTCGAC CTGGTGTCGA AGCGCGAACC CGACCTGATC
GTCGCGTTCG GCGGCCACGC GATGGCGGCC GGCCTCACGC TCGGCACCGA CGACGTGCCG
CGCTTCGCGG CCGCGTTCGA GGCGGTGGCG CGCGAGTGGC TGTCCGACGA CGCGCTCGCG
CGCGTGATCG AGACCGACGG CGAACTGGAA GACGCGTATT TCACGCCGCA GTTCGTCGGG
CTGCTCGACG AAGCCGTCTG GGGCCAGGGC TTTCCGGCCC CGCTTTTCTC CGGCGAGTTC
GACGTCGTGT CGCAGTCGCT CGTGAAGGAA AAGCACCTGA AGCTGCAGCT GGCGCGCGGC
CGCCAGCGCT TCAACGCGAT CTGGTTCAAC CACACCGAGC CGCTGCCGGC GAGCGCGCTG
ATCGCGTATC GCCTCGTCGC CGACACGTGG AACGGCGTGA CGCGCGTCCA GCTGATCGTC
GAGCACGCGG CCGGCTGA
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| Protein sequence | MTRIVTRPVA PADAEALARH GLHPVLARLY ASRGVQSPTD IETALARLVP PTELKGCADA
AALLADAIAD KRRLLVVADY DCDGATACAV AVRGLRMFGA QIDYLVPNRF EYGYGLTPEI
VELAAARKPD LLITVDNGIA SVAGVEAANA RGIDVLVTDH HLPGDALPAA RAIVNPNQPG
CAFPSKHIAG VGVMFYVLLA LRAELRRRGA FASKEAEPRL DGLLDLVALG TVADVVRLDG
NNRVLVAQGL QRIRNGRMQP GIAALFRAAG REARTASGFD LGFGLGPRLN AAGRLSDMSL
GIECLITDDI GRAWDLAQQL DVMNRERREI EAGMQQQALA DLADVDPADA CTITLFNPEW
HQGVIGIVAG RLKEKFHRPS FTFAHADEAG TRVKGSGRSI PGFHLRDALD LVSKREPDLI
VAFGGHAMAA GLTLGTDDVP RFAAAFEAVA REWLSDDALA RVIETDGELE DAYFTPQFVG
LLDEAVWGQG FPAPLFSGEF DVVSQSLVKE KHLKLQLARG RQRFNAIWFN HTEPLPASAL
IAYRLVADTW NGVTRVQLIV EHAAG
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