Gene Bamb_2109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_2109 
Symbol 
ID4310242 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp2318197 
End bp2319450 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content63% 
IMG OID638149934 
Productaspartate kinase 
Protein accessionYP_773999 
Protein GI115352160 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0527] Aspartokinases 
TIGRFAM ID[TIGR00657] aspartate kinase
[TIGR00656] aspartate kinase, monofunctional class 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.371456 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACTCA TCGTACACAA ATACGGCGGC ACTTCGATGG GCTCGGTCGA GCGCATCAAG 
AACGTCGCGA AACGCGTCGC AAAATGGCAT CAGGCCGGGC ACCAGATGGT GGTCGTGCCG
TCCGCGATGT CCGGCGAAAC CAACCGTCTG CTCGGTCTCG CGAAAGAGAT TTCGAGCCAG
CCGAGCCCGC GTGAGCTCGA CATGATCGCG TCGACCGGCG AGCAGGTCAG CGTCGGCCTG
CTGTCGATCG CGCTGCAGGA AATCGGCGTC GAAGCCGTGA GCTACGCCGG CTGGCAAGTG
CCGATCAAGA CGGACAACGC GTACACGAAG GCGCGTATCC ACTCGATCGA CGACGAGCGG
GTGAAGGCCG ATCTGAACGC CGGCAAGGTC GTGATCATCA CGGGTTTCCA GGGCGTCGAT
CCGGACGGCC ACATCACGAC GCTGGGCCGC GGCGGCTCGG ACACGTCGGC GGTGGCGGTC
GCGGCCGCGC TGGATGCCGC AGAGTGCCTG ATCTACACGG ACGTCGACGG CGTCTACACG
ACCGACCCGC GCGTGGTCGA AGAGGCGCGA CGCCTCGACC GCGTGACGTT CGAGGAAATG
CTGGAAATGG CCAGCCTCGG CTCGAAGGTC CTGCAGATCC GCTCGGTCGA ATTCGCCGGC
AAATACCAGG TGAAGACGCG TGTGCTGTCG AGCCTGACCG ATCCGCTGAT TGCGCTCGAC
GAAGAAATGC GCTCGGGCAC CCTGATTACT TTTGAAGAAG ACGAGACCAT GGAAAAGGCA
GTCATTTCCG GCATCGCGTT CCAGCGCGAC GAAGCACGCA TTGCGGTGAT GGGCGTGCCC
GACAAGCCGG GCATCGCGTA TCAGATCCTC GGCCCGGTCG CCGACGCGAA CGTCGACGTC
GACATGATCA TCCAGAACCA GAGCGTCGAG GGCAAGACCG ACTTCACGTT CACGGTCGGT
CGCGGCGACT ACCAGAAGGC GATGGACATC CTCACCAACC AGGTGAAGGG CCATGTGAGC
GCCGAGCGCG TGCAGGGCGA CCCGAAGGTG TCGAAGGTGT CGGTCGTCGG CGTCGGCATG
CGTTCGCACG TGGGCGTCGC GAGCAAGATG TTCCGCACGC TGTCGGAAGA GGGCATCAAC
ATCCAGATGA TCTCGACGTC CGAAATCAAG ATTTCGGTGC TGATCGACGA GAAGTACATG
GAACTGGCCG TCCGCGCGCT GCACAAGGCA TTCGAACTCG AGCAGGCGGC GTGA
 
Protein sequence
MALIVHKYGG TSMGSVERIK NVAKRVAKWH QAGHQMVVVP SAMSGETNRL LGLAKEISSQ 
PSPRELDMIA STGEQVSVGL LSIALQEIGV EAVSYAGWQV PIKTDNAYTK ARIHSIDDER
VKADLNAGKV VIITGFQGVD PDGHITTLGR GGSDTSAVAV AAALDAAECL IYTDVDGVYT
TDPRVVEEAR RLDRVTFEEM LEMASLGSKV LQIRSVEFAG KYQVKTRVLS SLTDPLIALD
EEMRSGTLIT FEEDETMEKA VISGIAFQRD EARIAVMGVP DKPGIAYQIL GPVADANVDV
DMIIQNQSVE GKTDFTFTVG RGDYQKAMDI LTNQVKGHVS AERVQGDPKV SKVSVVGVGM
RSHVGVASKM FRTLSEEGIN IQMISTSEIK ISVLIDEKYM ELAVRALHKA FELEQAA